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SCNpilot_expt_1000_bf_scaffold_10409

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10409_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1095
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003775891
Uncharacterized protein {ECO:0000313|EMBL:AHB49387.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10409_2
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1240..1965
DNA (726bp) protein (242aa)
Haloacid dehalogenase n=1 Tax=Burkholderia sp. SJ98 RepID=K8RI04_9BURK
Haloacid dehalogenase {ECO:0000313|EMBL:KHJ53519.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
HAD-superfamily hydrolase subfamily IA variant2
SCNpilot_expt_1000_bf_scaffold_10409_3
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2150..2311)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SE40_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB48762.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10409_4
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2508..3128
DNA (621bp) protein (207aa)
3'-5' exonuclease (EC:3.1.13.-); K03684 ribonuclease D [EC:3.1.13.5] rbh
3'-5' exonuclease {ECO:0000313|EMBL:CCB63616.1}; EC=3.1.13.- {ECO:0000313|EMBL:CCB63616.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
3'-5' exonuclease n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8N9_HYPSM rbh
SCNpilot_expt_1000_bf_scaffold_10409_5
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3260..5302
DNA (2043bp) protein (681aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000378C108 rbh
Organic solvent tolerance protein OstA {ECO:0000313|EMBL:AHB47633.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
OstA family protein rbh
SCNpilot_expt_1000_bf_scaffold_10409_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5891..6139
DNA (249bp) protein (83aa)
Putative ABC transporter, ATPase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8N8_HYPSM
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADJ22220.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_10409_7
unknown

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6324..6431
DNA (108bp) protein (36aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036F59CC
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
RNA polymerase sigma-54 factor; K03092 RNA polymerase sigma-54 factor
Displaying 7 items

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