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SCNpilot_expt_1000_bf_scaffold_11670

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11670_1
unknown

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comp(1..1242)
DNA (1242bp) protein (414aa)
gltA; citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1]
Citrate synthase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J874_HYPSM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000313|EMBL:CPR21212.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_11670_2
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1373..2806)
DNA (1434bp) protein (478aa)
gltX; glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Glutamate--tRNA ligase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IY30_POLGS
SCNpilot_expt_1000_bf_scaffold_11670_3
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2911..3777)
DNA (867bp) protein (289aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFH11556.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EFH11556.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMB5_9PROT
SCNpilot_expt_1000_bf_scaffold_11670_4
unknown

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comp(3812..3973)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11670_5
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4064..5383)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000362AE7D rbh
Putative pyruvate dehydrogenase E1 beta subunit {ECO:0000313|EMBL:EDP66858.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
putative pyruvate dehydrogenase E1 beta subunit
SCNpilot_expt_1000_bf_scaffold_11670_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5376..5906)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000378ED5E
putative acetoin:2,6-dichlorophenolindophenol oxidoreductase, subunit alpha
Putative acetoin:2,6-dichlorophenolindophenol oxidoreductase, subunit alpha {ECO:0000313|EMBL:AGU52274.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Displaying 6 items

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