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SCNpilot_expt_1000_bf_scaffold_11865

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11865_1
unknown

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2..142
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11865_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(154..1260)
DNA (1107bp) protein (369aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUV3_9RHIZ
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:EIM27745.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_expt_1000_bf_scaffold_11865_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1276..1527)
DNA (252bp) protein (84aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
short-chain dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B62ED8
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:AKF03071.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCNpilot_expt_1000_bf_scaffold_11865_4
unknown

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1685..2215
DNA (531bp) protein (177aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11865_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3384..4073
DNA (690bp) protein (230aa)
allophanate hydrolase (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N9Y2_RHOPA
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CAE26847.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_expt_1000_bf_scaffold_11865_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4085..4792)
DNA (708bp) protein (236aa)
Transcriptional regulator, GntR family n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VKD2_RHOPX
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADU45611.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_1000_bf_scaffold_11865_7
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4803..5192)
DNA (390bp) protein (130aa)
Enoyl-CoA hydratase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H2K6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC57207.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_11865_8
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5156..6568)
DNA (1413bp) protein (471aa)
glutamyl-tRNA(Gln) amidotransferase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GGQ4_9BRAD
Glutamyl-tRNA(Gln) amidotransferase {ECO:0000313|EMBL:BAL06358.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_expt_1000_bf_scaffold_11865_9
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6572..6763)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SUJ8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD97875.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_11865_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6778..8532)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PNV8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42509.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein rbh
Displaying 10 items

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