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SCNpilot_expt_1000_bf_scaffold_3208

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3208_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(35..1294)
DNA (1260bp) protein (420aa)
Arabinose efflux permease family protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YHU8_9BRAD rbh
Arabinose ABC transporter permease {ECO:0000313|EMBL:ETR74809.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3208_2
unknown

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1331..1495
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3208_3
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1582..2400
DNA (819bp) protein (273aa)
UPI0003CF4AB5 related cluster n=1 Tax=unknown RepID=UPI0003CF4AB5
Sulfurtransferase {ECO:0000313|EMBL:ESY33996.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3208_4
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2414..3739
DNA (1326bp) protein (442aa)
Putative chromate transport protein ChrA putative membrane protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGH8_HYPSM rbh
chromate transport protein ChrA; K07240 chromate transporter rbh
Putative chromate transport protein ChrA putative membrane protein {ECO:0000313|EMBL:CCB64282.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_3208_5
unknown

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comp(3740..4090)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3208_6
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4161..6452
DNA (2292bp) protein (764aa)
dme; malic enzyme (EC:1.1.1.39); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
NAD-dependent malic enzyme {ECO:0000313|EMBL:ACI97845.1}; EC=1.1.1.39 {ECO:0000313|EMBL:ACI97845.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
NAD-dependent malic enzyme n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQV9_RHOCS
SCNpilot_expt_1000_bf_scaffold_3208_7
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6473..7261
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3C6I2_9RHIZ rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KFB08687.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_expt_1000_bf_scaffold_3208_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7336..8379)
DNA (1044bp) protein (348aa)
Transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JE05_AGRRK rbh
transporter rbh
Transporter {ECO:0000313|EMBL:ACM28351.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_expt_1000_bf_scaffold_3208_9
unknown

Not on your lists

comp(8601..9662)
DNA (1062bp) protein (354aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:CPR20428.1}; EC=3.6.3.31 {ECO:0000313|EMBL:CPR20428.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
ABC transporter; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] rbh
Iron ABC transporter ATP-binding protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCG5_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_3208_10
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9798..10652)
DNA (855bp) protein (285aa)
Chromosome segregation and condensation protein, ScpB n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J680_HYPSM rbh
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B rbh
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_3208_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10701..11564)
DNA (864bp) protein (288aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAK7_9RHIZ rbh
chromosome segregation and condensation protein ScpA rbh
Chromosome segregation and condensation protein ScpA {ECO:0000313|EMBL:AGK57541.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_3208_12
unknown

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12067..12693
DNA (627bp) protein (209aa)

This feature has no annotations

Displaying 12 items

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