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SCNpilot_expt_1000_bf_scaffold_3411

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3411_1
unknown

Not on your lists

comp(438..1640)
DNA (1203bp) protein (401aa)
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:CPR16439.1}; EC=2.3.1.- {ECO:0000313|EMBL:CPR16439.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8R0_9BRAD
SCNpilot_expt_1000_bf_scaffold_3411_2
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1723..3126)
DNA (1404bp) protein (468aa)
Sodium/solute symporter protein n=3 Tax=Azotobacter vinelandii RepID=C1DGM4_AZOVD
sodium/solute symporter protein
Sodium/solute symporter protein {ECO:0000313|EMBL:AGK21972.1}; TaxID=1283331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii CA6.;"
SCNpilot_expt_1000_bf_scaffold_3411_3
unknown

Not on your lists

comp(3202..4245)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI0003605E2B rbh
XdhC/CoxI family protein {ECO:0000313|EMBL:CPR22149.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
XdhC/CoxI family protein rbh
SCNpilot_expt_1000_bf_scaffold_3411_4
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4418..5353)
DNA (936bp) protein (312aa)
Transcriptional regulator, IclR family protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FU64_9RHOB
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:EDM70136.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;"
IclR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3411_5
unknown

Not on your lists

comp(5480..5959)
DNA (480bp) protein (160aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
phosphoribosyl-AMP cyclohydrolase; K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037ED8FF
SCNpilot_expt_1000_bf_scaffold_3411_6
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6166..6813)
DNA (648bp) protein (216aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R8D9_9RHIZ
SCNpilot_expt_1000_bf_scaffold_3411_7
bacterium YEK0313, Bacteria

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7267..7734
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003766580
nitrogen-fixing NifU domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ12669.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_expt_1000_bf_scaffold_3411_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7734..8117
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SES8_9RHIZ
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3411_9
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8062..8373)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MD69_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP25388.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_expt_1000_bf_scaffold_3411_10
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8477..9427)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TE35_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE04723.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3411_11
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9658..10845)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HEK4_9BRAD rbh
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KJB94564.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_3411_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11066..11590)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003604FE4
Uncharacterized protein {ECO:0000313|EMBL:KFC74448.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3411_13
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11867..12097)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037C5BDE
Arylsulfate sulfotransferase {ECO:0000313|EMBL:AHB49513.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
arylsulfate sulfotransferase-like protein
SCNpilot_expt_1000_bf_scaffold_3411_14
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12094..12342)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0G2_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEE43710.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3411_15
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12362..12778)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RIP2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR25956.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3411_16
unknown

Not on your lists

comp(12898..12978)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 16 items

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