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SCNpilot_expt_1000_bf_scaffold_9318

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9318_1
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..215
DNA (213bp) protein (71aa)
pdxJ; pyridoxine 5'-phosphate synthase PdxJ (EC:2.6.99.2); K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2]
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZLX1_ROSLO
SCNpilot_expt_1000_bf_scaffold_9318_2
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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212..625
DNA (414bp) protein (138aa)
acpS; 4'-phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036E0CDC
Tax=RBG_16_Alphaproteobacteria_64_48_curated
SCNpilot_expt_1000_bf_scaffold_9318_3
unknown

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783..1154
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036F8FDE
SCNpilot_expt_1000_bf_scaffold_9318_4
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1199..1426
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003696311
hypothetical protein; K09888 cell division protein ZapA
Tax=RBG_16_Alphaproteobacteria_64_48_curated
SCNpilot_expt_1000_bf_scaffold_9318_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1431..2189
DNA (759bp) protein (253aa)
glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Putative glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCB64347.1}; EC=3.1.4.46 {ECO:0000313|EMBL:CCB64347.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Putative glycerophosphoryl diester phosphodiesterase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGN8_HYPSM
SCNpilot_expt_1000_bf_scaffold_9318_6
unknown

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comp(2186..3151)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003788944 rbh
Uncharacterized protein {ECO:0000313|EMBL:CPR18562.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_9318_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3373..3702
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QIP6_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE28061.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_expt_1000_bf_scaffold_9318_8
unknown

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comp(3718..3831)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9318_9
unknown

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4040..4729
DNA (690bp) protein (230aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9318_10
unknown

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4726..4872
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9318_11
unknown

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5169..5396
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9318_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5984..6163)
DNA (180bp) protein (60aa)
Peptide chain release factor 1 n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=RF1_AROAE
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying 12 items

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