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SCNpilot_expt_1000_bf_scaffold_9545

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9545_1
unknown

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comp(1..459)
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9545_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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509..1621
DNA (1113bp) protein (371aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
integral membrane sensor signal transduction histidine kinase; K14980 two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036043A5
SCNpilot_expt_1000_bf_scaffold_9545_3
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1899..3149
DNA (1251bp) protein (417aa)
Arabinose efflux permease family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKB1_AZOSU
arabinose efflux permease family protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
SCNpilot_expt_1000_bf_scaffold_9545_4
unknown

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comp(3156..4076)
DNA (921bp) protein (307aa)
Agmatinase {ECO:0000313|EMBL:CPR21886.1}; EC=3.5.3.11 {ECO:0000313|EMBL:CPR21886.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
speB; agmatinase (EC:3.5.3.11); K01480 agmatinase [EC:3.5.3.11] rbh
Agmatinase n=1 Tax=Coxiella burnetii (strain Dugway 5J108-111) RepID=A9KDQ9_COXBN rbh
SCNpilot_expt_1000_bf_scaffold_9545_5
R_NC10_66_22, NC10, Bacteria

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4232..5173
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P748_9BRAD
oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCNpilot_expt_1000_bf_scaffold_9545_6
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5315..7015)
DNA (1701bp) protein (567aa)
Glycosyl transferase family 2 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I5V7_RHOVT rbh
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADP69460.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
SCNpilot_expt_1000_bf_scaffold_9545_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7359..8219
DNA (861bp) protein (287aa)
Extracellular solute-binding protein family 3 n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JR98_HYPDA rbh
family 3 extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein rbh
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADJ24083.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_9545_8
unknown

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comp(8264..8692)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7R2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR19799.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
Displaying 8 items

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