name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_5623_1
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..159
|
Probable amino acid-binding protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GL83_9BURK
cationic amino acid ABC transporter periplasmic binding protein; K09969 general L-amino acid transport system substrate-binding protein
Probable amino acid-binding protein {ECO:0000313|EMBL:EDM84764.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5623_2
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(182..1069)
|
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGP0_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB64349.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5623_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1274..2125)
|
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / D
Succinyl-diaminopimelate desuccinylase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPG6_HYPDA
|
|
SCNpilot_expt_1000_bf_scaffold_5623_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2122..2418)
|
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / D
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000367A693
|
|
SCNpilot_expt_1000_bf_scaffold_5623_5
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2692..3378)
|
Chemotaxis protein CheY n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBY9_9RHIZ
rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:AHB47489.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
two component transcriptional regulator PhoB, winged helix family protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_5623_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3554..4273)
|
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7I1_9RHIZ
phosphate uptake regulator PhoU
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5623_7
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4410..5747)
|
histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003642741
rbh
Tax=RBG_16_Alphaproteobacteria_64_48_curated
|
|
SCNpilot_expt_1000_bf_scaffold_5623_8
unknown
|
Not on your lists |
comp(5889..6257)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5623_9
unknown
|
Not on your lists |
comp(6262..6867)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5623_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6900..7223
|
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5B111
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_5623_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7334..7828)
|
glutathione S-transferase-like protein (EC:2.5.1.18); K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V864_9BRAD
Glutathione S-transferase domain protein {ECO:0000313|EMBL:EFI51424.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5623_12
Mycobacterium liflandii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
7978..8394
|
gloA_3; glyoxalase, GloA_3 (EC:4.4.1.5)
Glyoxalase, GloA_3 {ECO:0000313|EMBL:AGC63908.1}; EC=4.4.1.5 {ECO:0000313|EMBL:AGC63908.1};; TaxID=459424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium liflandii (strain 128FXT).;"
Glyoxalase, GloA_3 n=3 Tax=Mycobacterium RepID=L7VBV0_MYCL1
|
|
SCNpilot_expt_1000_bf_scaffold_5623_13
unknown
|
Not on your lists |
8387..8590
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5623_14
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8594..10153
|
Carbohydrate kinase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B8C2_9RHIZ
rbh
carbohydrate kinase
rbh
Carbohydrate kinase {ECO:0000313|EMBL:AGK58477.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5623_15
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10863..11249
|
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z1E2_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM86948.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5623_16
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11187..12050)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z1F4_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM86963.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5623_17
unknown
|
Not on your lists |
comp(12192..12860)
|
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000369492A
Extensin family protein {ECO:0000313|EMBL:CPR22518.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
Extensin family protein
|
|
SCNpilot_expt_1000_bf_scaffold_5623_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13125..13757
|
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KMM3_9GAMM
Glutathione S-transferase {ECO:0000313|EMBL:EWY39415.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5623_19
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13829..14755
|
Dihydrodipicolinate synthetase n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3U915_ADVKW
rbh
dihydrodipicolinate synthetase
rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
|
|
SCNpilot_expt_1000_bf_scaffold_5623_20
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14763..15950
|
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
UPI0003CDEAA0 related cluster n=1 Tax=unknown RepID=UPI0003CDEAA0
uncharacterized Fe-S protein
|
|
SCNpilot_expt_1000_bf_scaffold_5623_21
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15947..16804
|
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037C4A2D
rbh
Epimerase {ECO:0000313|EMBL:AHB47626.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
NAD-dependent epimerase/dehydratase
|
|
SCNpilot_expt_1000_bf_scaffold_5623_22
unknown
|
Not on your lists |
16983..17225
|
This feature has no annotations |