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SCNpilot_expt_1000_bf_scaffold_5717

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5717_1
Rhizobium sp. NT-26, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..258)
DNA (258bp) protein (86aa)
Putative TRAP-type transporter periplasmic subunit, possible TauK-like sulfonate transporter n=1 Tax=Rhizobium sp. RepID=L0NNP6_RHISP
Putative TRAP-type transporter periplasmic subunit, possible TauK-like sulfonate transporter {ECO:0000313|EMBL:CCF22267.1}; TaxID=1125847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. NT-26.;"
SCNpilot_expt_1000_bf_scaffold_5717_2
RLO_PLX_64_10, Bacteria

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492..1259
DNA (768bp) protein (256aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037138E1
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_expt_1000_bf_scaffold_5717_3
RLO_PLX_64_10, Bacteria

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1276..2073
DNA (798bp) protein (266aa)
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSG6_9FIRM
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_expt_1000_bf_scaffold_5717_4
unknown

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2133..3731
DNA (1599bp) protein (533aa)
Alcohol dehydrogenase [acceptor] {ECO:0000313|EMBL:CPR21934.1}; EC=1.1.99.- {ECO:0000313|EMBL:CPR21934.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
glucose-methanol-choline oxidoreductase; K00119 [EC:1.1.99.-] rbh
choline dehydrogenase n=1 Tax=Amorphus coralli RepID=UPI00037F6E3A rbh
SCNpilot_expt_1000_bf_scaffold_5717_5
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4042..5355)
DNA (1314bp) protein (438aa)
TRAP-type C4-dicarboxylate transport system, large permease component n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QRL1_9RHOB rbh
TRAP C4-dicarboxylate transporter permease {ECO:0000313|EMBL:KCV81341.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium atlanticum.;"
dctQ; large permease
SCNpilot_expt_1000_bf_scaffold_5717_6
unknown

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comp(5403..5948)
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5717_7
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6014..6859)
DNA (846bp) protein (282aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9RW71_9RHOB
Extracellular solute-binding protein {ECO:0000313|EMBL:KCV81339.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium atlanticum.;"
hypothetical protein
Displaying 7 items

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