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SCNpilot_expt_1000_bf_scaffold_5826

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5826_1
unknown

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comp(2..196)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5826_2
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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512..1648
DNA (1137bp) protein (379aa)
ccrfM; adenine-specific DNA methyltransferase (EC:2.1.1.72); K13581 modification methylase [EC:2.1.1.72] rbh
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J948_HYPSM rbh
SCNpilot_expt_1000_bf_scaffold_5826_3
unknown

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comp(1721..2047)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003659CAF
Uncharacterized protein {ECO:0000313|EMBL:CPR21359.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5826_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2390..3178
DNA (789bp) protein (263aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQE4_HYPDA rbh
SCNpilot_expt_1000_bf_scaffold_5826_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3406..4596
DNA (1191bp) protein (397aa)
nuoD; NADH-quinone oxidoreductase subunit D (EC:1.6.5.3); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
NADH-quinone oxidoreductase subunit D n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J906_HYPSM rbh
SCNpilot_expt_1000_bf_scaffold_5826_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4930..5508
DNA (579bp) protein (193aa)
alpha/beta hydrolase fold protein; K03928 carboxylesterase [EC:3.1.1.1]
Alpha/beta hydrolase fold protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPN3_HYPDA
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADJ23767.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Displaying 6 items

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