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SCNpilot_expt_1000_bf_scaffold_5986

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5986_1

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1..150
DNA (150bp) protein (50aa)
Glycine cleavage H-protein n=1 Tax=mine drainage metagenome RepID=T0ZDA1_9ZZZZ
Glycine cleavage H-protein {ECO:0000313|EMBL:EQD42202.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glycine cleavage system protein H; K02437 glycine cleavage system H protein
SCNpilot_expt_1000_bf_scaffold_5986_2
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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200..1009
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037F1CE4 rbh
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:KFG67839.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
N-formylglutamate amidohydrolase rbh
SCNpilot_expt_1000_bf_scaffold_5986_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1041..1343
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7R0_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59033.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_5986_4
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1381..1815
DNA (435bp) protein (145aa)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:BAQ18571.1}; EC=3.6.1.13 {ECO:0000313|EMBL:BAQ18571.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
NUDIX hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]
NUDIX hydrolase, core domain protein n=1 Tax=mine drainage metagenome RepID=T0ZZT2_9ZZZZ
SCNpilot_expt_1000_bf_scaffold_5986_5
unknown

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1852..3114
DNA (1263bp) protein (421aa)
Major facilitator superfamily MFS_1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY50_PARL1 rbh
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:CPR22602.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
major facilitator superfamily transporter rbh
SCNpilot_expt_1000_bf_scaffold_5986_6
unknown

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comp(3124..3855)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SXH0_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:CPR18400.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein; K07090
SCNpilot_expt_1000_bf_scaffold_5986_7
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4007..4981)
DNA (975bp) protein (325aa)
Zn-binding quinone oxidoreductase (EC:1.6.5.5) rbh
NADPH:quinone oxidoreductase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S9W6_9RHIZ rbh
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:AHB47418.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_5986_8
unknown

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5033..5479
DNA (447bp) protein (149aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JDW6_HYPSM
tRNA/rRNA methyltransferase (SpoU) (Modular protein) {ECO:0000313|EMBL:CPR17044.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
tRNA/rRNA methyltransferase SpoU
SCNpilot_expt_1000_bf_scaffold_5986_9
unknown

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5655..6083
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBK9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR17040.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
Displaying 9 items

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