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SCNpilot_expt_1000_bf_scaffold_14342

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14342_1
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1301)
DNA (1299bp) protein (433aa)
hbaB; 4-hydroxyphenylacetate 3-hydroxylase HbaB; K14534 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3]
4-hydroxyphenylacetate 3-hydroxylase HbaB n=2 Tax=Oligotropha carboxidovorans RepID=B6JFM4_OLICO
4-hydroxyphenylacetate 3-hydroxylase {ECO:0000313|EMBL:KJS42785.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
SCNpilot_expt_1000_bf_scaffold_14342_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1515..2594
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002D4CCDD rbh
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_14342_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2651..2926
DNA (276bp) protein (92aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_14342_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2999..3169
DNA (171bp) protein (57aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_14342_5
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3276..4640
DNA (1365bp) protein (455aa)
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVK8_9PROT rbh
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family {ECO:0000313|EMBL:EHM02972.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Blr7582 protein rbh
SCNpilot_expt_1000_bf_scaffold_14342_6
unknown

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4742..5224
DNA (483bp) protein (161aa)
FMN reductase (NADH) RutF {ECO:0000313|EMBL:CPR20098.1}; EC=1.5.1.42 {ECO:0000313|EMBL:CPR20098.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000300B3EE
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_14342_7
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5482..6423)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037387B9
DNA replication initiation ATPase
Tax=RBG_16_Alphaproteobacteria_64_48_curated
SCNpilot_expt_1000_bf_scaffold_14342_8
unknown

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comp(6429..6845)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003624AB6
Uncharacterized protein {ECO:0000313|EMBL:CPR22056.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
DNA replication initiation ATPase
SCNpilot_expt_1000_bf_scaffold_14342_9
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7299..7751
DNA (453bp) protein (151aa)
alaS; alanine--tRNA ligase AlaS (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
Alanine--tRNA ligase n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X9Q9_RHIFR
Displaying 9 items

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