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SCNpilot_expt_1000_bf_scaffold_14371

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14371_1
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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comp(2..415)
DNA (414bp) protein (138aa)
ParB domain-containing protein nuclease n=1 Tax=Haloplasma contractile SSD-17B RepID=F7Q0I4_9BACT
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
SCNpilot_expt_1000_bf_scaffold_14371_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(633..1139)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SE22_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB49126.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_14371_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1153..1755)
DNA (603bp) protein (201aa)
Cold-shock DNA-binding domain protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JV49_HYPDA rbh
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) rbh
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADJ22865.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_14371_4
unknown

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comp(1718..1915)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14371_5
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2240..2680
DNA (441bp) protein (147aa)
Lactoylglutathione lyase {ECO:0000313|EMBL:ESR23327.1}; EC=4.4.1.5 {ECO:0000313|EMBL:ESR23327.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Lactoylglutathione lyase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QU82_9RHIZ
SCNpilot_expt_1000_bf_scaffold_14371_6
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2952..3872
DNA (921bp) protein (307aa)
HI0933 family protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IH78_METNO
hypothetical protein; K07007
HI0933 family protein {ECO:0000313|EMBL:ACL59770.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_14371_7
unknown

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4070..4318
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Pseudogymnoascus destructans (strain ATCC MYA-4855 / 20631-21) RepID=L8FQK7_PSED2
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
RNA chaperone Hfq; K03666 host factor-I protein
SCNpilot_expt_1000_bf_scaffold_14371_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4541..5743
DNA (1203bp) protein (401aa)
GTP-binding protein HflX n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEA4_9RHIZ rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
GTP-binding proten HflX rbh
SCNpilot_expt_1000_bf_scaffold_14371_9

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5838..6425
DNA (588bp) protein (196aa)
DedA family protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RDC4_9RHIZ
Marine sediment metagenome DNA, contig: S01H1_S21293 {ECO:0000313|EMBL:GAG25601.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DedA family protein
SCNpilot_expt_1000_bf_scaffold_14371_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6517..6843
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JXK5_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ25186.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Displaying 10 items

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