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SCNpilot_expt_1000_bf_scaffold_15492

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_15492_1
unknown

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comp(3..611)
DNA (609bp) protein (203aa)
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:CPR22470.1}; EC=2.5.1.90 {ECO:0000313|EMBL:CPR22470.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
ispB; octaprenyl diphosphate synthase (EC:2.5.1.-); K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90]
Octaprenyl diphosphate synthase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8E3_HYPSM
SCNpilot_expt_1000_bf_scaffold_15492_2
unknown

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comp(778..1032)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15492_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1242..1907
DNA (666bp) protein (222aa)
luciferase family protein; K14733 limonene 1,2-monooxygenase [EC:1.14.13.107]
Luciferase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTN2_PARL1
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_15492_4
unknown

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comp(2374..2577)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15492_5
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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2903..3031
DNA (129bp) protein (43aa)
FAD dependent oxidoreductase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HR14_AZOC5
FAD dependent oxidoreductase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCNpilot_expt_1000_bf_scaffold_15492_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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3294..3923
DNA (630bp) protein (210aa)
Hydrogenase accessory protein-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXD6_POLGS
hydrogenase accessory protein-like protein; K03192 urease accessory protein
Hydrogenase accessory protein-like protein {ECO:0000313|EMBL:ADZ70454.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_15492_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4067..4297
DNA (231bp) protein (77aa)
Alpha/beta hydrolase fold protein id=4923987 bin=GWC2_Methylomirabilis_70_16 species=Achromobacter arsenitoxydans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_expt_1000_bf_scaffold_15492_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4311..5174
DNA (864bp) protein (288aa)
Alpha/beta hydrolase fold protein id=4923987 bin=GWC2_Methylomirabilis_70_16 species=Achromobacter arsenitoxydans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
alpha/beta hydrolase fold protein rbh
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_expt_1000_bf_scaffold_15492_9
bacterium YEK0313, Bacteria

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5432..5965
DNA (534bp) protein (178aa)
cyclase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FFA9EE
Kynurenine formamidase {ECO:0000313|EMBL:CEJ15789.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative cyclase
SCNpilot_expt_1000_bf_scaffold_15492_10
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6182..6664
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCK0_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65176.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_15492_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6737..7885)
DNA (1149bp) protein (383aa)
Thiamine pyrophosphate protein id=4148695 bin=GWC2_Syntrophobacterales_56_13 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
thiamine pyrophosphate protein central region
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCNpilot_expt_1000_bf_scaffold_15492_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7848..8390)
DNA (543bp) protein (181aa)
thiamine pyrophosphate domain-containing TPP-binding protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FDQ9_DESAA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_expt_1000_bf_scaffold_15492_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8439..9071)
DNA (633bp) protein (211aa)
formyl-coenzyme A transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16]
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI0003605031
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Displaying 13 items

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