name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_4122_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34..438)
|
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002FE4DDF
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KGT78141.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
|
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SCNpilot_expt_1000_bf_scaffold_4122_2
unknown
|
Not on your lists |
783..1220
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4122_3
uncultured alpha proteobacterium HF0130_20P23, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1423..1944
|
Transcriptional regulators n=1 Tax=uncultured alpha proteobacterium HF0130_20P23 RepID=E0XT89_9PROT
Transcriptional regulators {ECO:0000313|EMBL:ADI17630.1}; TaxID=710809 species="Bacteria; Proteobacteria; Alphaproteobacteria; environmental samples.;" source="uncultured alpha proteobacterium HF0130_20P23.;"
putative MarR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_4122_4
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1947..3035
|
Putative efflux pump protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIT9_9PROT
rbh
Putative efflux pump protein {ECO:0000313|EMBL:EDP66570.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
secretion protein HlyD; K03543 multidrug resistance protein A
|
|
SCNpilot_expt_1000_bf_scaffold_4122_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3036..4115)
|
UPI0003CFBFD7 related cluster n=1 Tax=unknown RepID=UPI0003CFBFD7
transcriptional regulator, MerR family
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
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SCNpilot_expt_1000_bf_scaffold_4122_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4466..5347)
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Putative thiosulfate sulfurtransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSR0_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_4122_7
unknown
|
Not on your lists |
5476..6267
|
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036AA113
rbh
Uncharacterized protein {ECO:0000313|EMBL:CPR15367.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4122_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6274..6981
|
Molecular chaperone DnaJ n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SHK0_9RHIZ
Molecular chaperone DnaJ {ECO:0000313|EMBL:AHB49419.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
heat shock protein DnaJ-like
|
|
SCNpilot_expt_1000_bf_scaffold_4122_9
unknown
|
Not on your lists |
7202..7543
|
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037EC0A0
Uncharacterized protein {ECO:0000313|EMBL:CPR21788.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4122_10
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
7622..8359
|
Phosphatidylcholine synthase {ECO:0000256|PIRNR:PIRNR000851}; Short=PC synthase {ECO:0000256|PIRNR:PIRNR000851};; Short=PCS {ECO:0000256|PIRNR:PIRNR000851};; EC=2.7.8.24 {ECO:0000256|PIRNR:PIRNR000851};; CDP-diglyceride-choline O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000851}; Flags: Precursor;; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).
Phosphatidylcholine synthase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I632_RHOVT
|
|
SCNpilot_expt_1000_bf_scaffold_4122_11
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8648..9052
|
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUA9_HYPDA
hypothetical protein
Tax=RBG_16_Alphaproteobacteria_64_48_curated
|
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SCNpilot_expt_1000_bf_scaffold_4122_12
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9059..9466)
|
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
Nucleotide pyrophosphohydrolase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFU8_9RHIZ
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:AHB48814.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
|
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SCNpilot_expt_1000_bf_scaffold_4122_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9906..10562)
|
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQD2_HYPDA
hypothetical protein; K06966
Uncharacterized protein {ECO:0000313|EMBL:ADJ23886.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4122_14
unknown
|
Not on your lists |
10825..11739
|
Putative enzyme {ECO:0000313|EMBL:CPR21868.1}; EC=5.1.-.- {ECO:0000313|EMBL:CPR21868.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035EDE59
rbh
phenazine biosynthesis protein PhzF family; K06998
rbh
|
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SCNpilot_expt_1000_bf_scaffold_4122_15
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12028..13674)
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Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ADJ24350.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ADJ24350.1};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Methylmalonyl-CoA mutase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSQ6_HYPDA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4122_16
unknown
|
Not on your lists |
14010..15806
|
GTP-binding protein TypA n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S9L7_9RHIZ
rbh
GTP-binding protein {ECO:0000313|EMBL:CPR16650.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
GTP-binding protein TypA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4122_17
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16758..18032)
|
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
rbh
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomic
Gamma-glutamyl phosphate reductase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0AZ50_9RHIZ
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4122_18
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18049..19224)
|
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Glutamate 5-kinase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQB0_HYPDA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4122_19
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19626..20522
|
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RPN5_9RHIZ
Transcriptional regulator, GntR family/amidohydrolase family protein {ECO:0000313|EMBL:ETW14097.1}; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanticus.;"
transcriptional regulator, GntR family/amidohydrolase family protein
|
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SCNpilot_expt_1000_bf_scaffold_4122_20
unknown
|
Not on your lists |
20534..20989
|
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00036E1E90
Predicted ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CPR14903.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
NUDIX hydrolase
|
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SCNpilot_expt_1000_bf_scaffold_4122_21
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
20989..21411
|
Methyltransferase type 12 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6U2_PARDP
methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:ABL71236.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
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