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SCNpilot_expt_1000_bf_scaffold_4245

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4245_1
unknown

Not on your lists

comp(112..1971)
DNA (1860bp) protein (620aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XPJ1_STAC7
Putative PAS domain S-box {ECO:0000313|EMBL:CPR17536.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
multi-sensor hybrid histidine kinase
SCNpilot_expt_1000_bf_scaffold_4245_2
unknown

Not on your lists

comp(2216..3031)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003601E06
Phyllosphere-induced regulator PhyR {ECO:0000313|EMBL:CPR20150.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
two-component response regulator
SCNpilot_expt_1000_bf_scaffold_4245_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3183..3734)
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JTT6_HYPDA
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_4245_4
unknown

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comp(3731..3922)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4245_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4173..4703)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9E1_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56690.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_4245_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4735..5061)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036BF41D
Uncharacterized protein {ECO:0000313|EMBL:AHB47789.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4245_7
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5224..6729)
DNA (1506bp) protein (502aa)
HSR1-like GTP-binding protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCP5_9RHIZ rbh
HSR1-like GTP-binding protein {ECO:0000313|EMBL:AHB47790.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
GTP-binding protein HSR1-like protein; K06946
SCNpilot_expt_1000_bf_scaffold_4245_8
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6858..7031)
DNA (174bp) protein (58aa)
UPF0391 membrane protein HYPDE_37068 n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BG53_9RHIZ
hypothetical protein
UPF0391 membrane protein HYPDE_37068 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_4245_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7286..9115
DNA (1830bp) protein (610aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JS66_HYPDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADJ22325.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_4245_10
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9337..11067)
DNA (1731bp) protein (577aa)
Sensor histidine kinase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFD4_PHEZH
sensor histidine kinase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Displaying 10 items

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