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SCNpilot_expt_1000_bf_scaffold_4303

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4303_1
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..363
DNA (363bp) protein (121aa)
Tripartite transporter large subunit n=1 Tax=Marinobacter sp. EVN1 RepID=U7NMQ1_9ALTE
trap-type mannitol/chloroaromatic compound transport system, large permease component
Tax=RBG_16_Deltaproteobacteria_44_11_curated
SCNpilot_expt_1000_bf_scaffold_4303_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(452..1045)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000364044C
protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_expt_1000_bf_scaffold_4303_3
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1153..3042)
DNA (1890bp) protein (630aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-); K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
ATP-dependent DNA helicase RecQ n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SG65_9RHIZ rbh
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AHB48944.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_4303_4
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3302..4837
DNA (1536bp) protein (512aa)
cytosol aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] rbh
Aminopeptidase A n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SD77_9RHIZ rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_4303_5
unknown

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comp(5126..5830)
DNA (705bp) protein (235aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057, ECO:0000313|EMBL:CPR19578.1};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370AC75 rbh
SCNpilot_expt_1000_bf_scaffold_4303_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6039..6890
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUS7_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ24707.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_4303_7
unknown

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6980..7285
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYM7_HYPDA
Uncharacterized protein {ECO:0000313|EMBL:CPR21555.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4303_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7423..8700
DNA (1278bp) protein (426aa)
Uncharacterized protein {ECO:0000313|EMBL:ETR79082.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_expt_1000_bf_scaffold_4303_9
unknown

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comp(9064..9720)
DNA (657bp) protein (219aa)
Electron transfer flavoprotein-ubiquinone oxidoreductase {ECO:0000313|EMBL:CPR22467.1}; EC=1.5.5.1 {ECO:0000313|EMBL:CPR22467.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAF6_9RHIZ
electron-transferring-flavoprotein dehydrogenase
Displaying 9 items

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