ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4315

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4315_1
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..533)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0GRX4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB06671.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
SEC-C motif domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4315_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(604..1116)
DNA (513bp) protein (171aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KOS6.;"
DNA methylase N-4/N-6 n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6CPU2_PSEST
DNA methylase N-4/N-6
SCNpilot_expt_1000_bf_scaffold_4315_3
unknown

Not on your lists

comp(2032..2889)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BFN4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR22422.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4315_4
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3074..3673
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J968_HYPSM
hypothetical protein; K07735 putative transcriptional regulator
UPF0301 protein HYPMC_4174 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_4315_5
unknown

Not on your lists

3706..3882
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4315_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3919..5229)
DNA (1311bp) protein (437aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9S3_9RHIZ rbh
3-deoxy-D-manno-octulosonic-acid transferase rbh
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:AGK58977.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_4315_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5719..6453
DNA (735bp) protein (245aa)
Protein tyrosine/serine phosphatase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JT64_HYPDA
protein tyrosine/serine phosphatase
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:ADJ24382.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_4315_8
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6699..8180
DNA (1482bp) protein (494aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VYM1_9BRAD
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EIG61727.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
Displaying 8 items

View Taxonomy