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SCNpilot_expt_1000_bf_scaffold_4558

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4558_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..668)
DNA (666bp) protein (222aa)
murein transglycosylase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037BCD05
ABC transporter amino acid-binding protein {ECO:0000313|EMBL:BAR58884.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
glnH; glutamine-binding protein GlnH
SCNpilot_expt_1000_bf_scaffold_4558_2
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(764..2152)
DNA (1389bp) protein (463aa)
aminotransferase (EC:2.6.1.-) id=14625640 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_expt_1000_bf_scaffold_4558_3
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2180..3349)
DNA (1170bp) protein (390aa)
Selenocysteine lyase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WDU7_9BRAD rbh
Selenocysteine lyase {ECO:0000313|EMBL:EJN10845.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
class V aminotransferase rbh
SCNpilot_expt_1000_bf_scaffold_4558_4
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3351..4652)
DNA (1302bp) protein (434aa)
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Glycine/serine hydroxymethyltransferase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CR04_9BRAD rbh
Glycine/serine hydroxymethyltransferase {ECO:0000313|EMBL:EJN10844.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
SCNpilot_expt_1000_bf_scaffold_4558_5
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4841..5740
DNA (900bp) protein (300aa)
Transcriptional regulator n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CR00_9BRAD
Transcriptional regulator {ECO:0000313|EMBL:EJN10839.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
LysR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4558_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5766..6698)
DNA (933bp) protein (311aa)
2-hydroxyacid dehydrogenase (EC:1.-.-.-); K12972 gyoxylate/hydroxypyruvate reductase A [EC:1.1.1.79 1.1.1.81]
2-hydroxyacid dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5J5_9PROT
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EKE78326.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_expt_1000_bf_scaffold_4558_7
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6720..6893)
DNA (174bp) protein (58aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
SCNpilot_expt_1000_bf_scaffold_4558_8

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comp(6853..7854)
DNA (1002bp) protein (334aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=1457714 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote AD1000_105_G07.;"
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00037E9813
SCNpilot_expt_1000_bf_scaffold_4558_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7985..8812
DNA (828bp) protein (276aa)
Transcriptional regulator, GntR family n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJR6_9CHLR
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCNpilot_expt_1000_bf_scaffold_4558_10
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8847..9920
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E29BAF
NAD/NADP octopine/nopaline dehydrogenase
NAD/NADP octopine/nopaline dehydrogenase {ECO:0000313|EMBL:ACS85590.1}; Flags: Precursor;; TaxID=579405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain Ech703).;"
Displaying 10 items

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