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SCNpilot_expt_1000_bf_scaffold_7845

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7845_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..465)
DNA (465bp) protein (155aa)
Transcriptional regulator, LysR family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZGR7_AZOL4
LysR family transcriptional regulator {ECO:0000313|EMBL:ETR76917.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
transcriptional regulator, LysR family
SCNpilot_expt_1000_bf_scaffold_7845_2
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(719..2107)
DNA (1389bp) protein (463aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
Signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIB8_NITHX rbh
sensor signal transduction histidine kinase rbh
SCNpilot_expt_1000_bf_scaffold_7845_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2109..2783)
DNA (675bp) protein (225aa)
Two component transcriptional regulatory protein, winged-helix family protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WQY8_9BRAD rbh
Transcriptional regulator {ECO:0000313|EMBL:ETR78315.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
two component transcriptional regulator; K07774 two-component system, OmpR family, response regulator TctD rbh
SCNpilot_expt_1000_bf_scaffold_7845_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3035..3577
DNA (543bp) protein (181aa)
Uncharacterized protein {ECO:0000313|EMBL:ETR79089.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_expt_1000_bf_scaffold_7845_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3574..4473
DNA (900bp) protein (300aa)
Secretion protein HlyD n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WQY7_9BRAD
Hemolysin secretion protein D {ECO:0000313|EMBL:ETR78316.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB
SCNpilot_expt_1000_bf_scaffold_7845_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4508..4795
DNA (288bp) protein (96aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WXI6_COMTE
Hemolysin secretion protein D {ECO:0000313|EMBL:ETR78316.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein; K15727 cobalt-zinc-cadmium resistance protein CzcB
SCNpilot_expt_1000_bf_scaffold_7845_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4845..6761
DNA (1917bp) protein (639aa)
cytochrome C peroxidase n=1 Tax=Comamonas testosteroni RepID=UPI00030D5DA7
Cytochrome C peroxidase {ECO:0000313|EMBL:ETR78317.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
heavy metal efflux pump CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_expt_1000_bf_scaffold_7845_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6743..7957
DNA (1215bp) protein (405aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WXI7_COMTE
Cytochrome C peroxidase {ECO:0000313|EMBL:ETR78317.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
CzcA family heavy metal efflux protein; K15726 cobalt-zinc-cadmium resistance protein CzcA
Displaying 8 items

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