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SCNpilot_expt_1000_bf_scaffold_7953

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7953_1
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..168
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SDB7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB48482.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7953_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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414..2048
DNA (1635bp) protein (545aa)
Ankyrin n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRM9_HYPDA rbh
ankyrin rbh
Ankyrin {ECO:0000313|EMBL:ADJ22258.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_7953_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2146..3489)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037E6A14 rbh
ferric reductase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_expt_1000_bf_scaffold_7953_4
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3738..4358)
DNA (621bp) protein (207aa)
OmpA/MotB domain protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I625_RHOVT
Membrane protein {ECO:0000313|EMBL:KAI94392.1}; Flags: Fragment;; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
OmpA/MotB domain-containing protein; K02040 phosphate transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_7953_5
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5157..6077)
DNA (921bp) protein (307aa)
Putative lipoprotein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CSS0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KAI94852.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7953_6
bacterium YEK0313, Bacteria

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6323..7327
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003810DE4 rbh
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CEJ15307.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
peptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_7953_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7324..8325
DNA (1002bp) protein (334aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JR97_9PROT rbh
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:EKE72979.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_7953_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8346..8522
DNA (177bp) protein (59aa)
Peptide ABC transporter permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2JD06_9PROT
Peptide ABC transporter permease {ECO:0000313|EMBL:EKE72978.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
Displaying 8 items

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