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SCNpilot_expt_1000_bf_scaffold_6053

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6053_1
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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381..1151
DNA (771bp) protein (257aa)
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=2 Tax=Pseudomonas putida RepID=R9V9C2_PSEPU
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase {ECO:0000313|EMBL:AGN81599.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
SCNpilot_expt_1000_bf_scaffold_6053_2
unknown

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comp(1238..1618)
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6053_3
Pseudomonas sp. H2, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1699..2166
DNA (468bp) protein (156aa)
Aminoglycoside phosphotransferase n=1 Tax=Pseudomonas putida H8234 RepID=R9VC62_PSEPU
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:KGI92152.1}; TaxID=658612 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. H2.;"
aminoglycoside phosphotransferase
SCNpilot_expt_1000_bf_scaffold_6053_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2163..2546
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUZ1_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI72220.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_expt_1000_bf_scaffold_6053_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2494..2907
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TWC1_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84504.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6053_6
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3165..4187)
DNA (1023bp) protein (341aa)
Muconate cycloisomerase {ECO:0000313|EMBL:BAQ17114.1}; EC=5.5.1.1 {ECO:0000313|EMBL:BAQ17114.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
Putative mandelate racemase/muconate lactonizing enzyme n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3T1_AZOL4
putative mandelate racemase/muconate lactonizing enzyme
SCNpilot_expt_1000_bf_scaffold_6053_7
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4321..5199)
DNA (879bp) protein (293aa)
citryl-CoA lyase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E09225
Citryl-CoA lyase {ECO:0000313|EMBL:GAK44278.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCNpilot_expt_1000_bf_scaffold_6053_8
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5439..6356
DNA (918bp) protein (306aa)
Putative membrane protein, DUF81 domain protein n=1 Tax=Rhizobium sp. RepID=L0NBZ2_RHISP
Permease {ECO:0000313|EMBL:EXL09429.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
putative permease; putative membrane protein
SCNpilot_expt_1000_bf_scaffold_6053_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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6490..7926
DNA (1437bp) protein (479aa)
succinate-semialdehyde dehydrogenase (NAD(P)+) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPK3_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_expt_1000_bf_scaffold_6053_10
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7978..8658)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000378B042
Uncharacterized protein {ECO:0000313|EMBL:BAQ18030.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6053_11
unknown

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comp(8665..8865)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000364C7F0
Displaying 11 items

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