name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_6082_1
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..504
|
3-hydroxy-3-methylglutaryl-CoA lyase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003722AFC
3-hydroxy-3-methylglutaryl-CoA lyase {ECO:0000313|EMBL:KJB96518.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
|
|
SCNpilot_expt_1000_bf_scaffold_6082_2
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
522..1703
|
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Ahrensia sp. R2A130 RepID=E0MTQ2_9RHOB
rbh
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EFL87539.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
acyl-CoA dehydrogenase domain-containing protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6082_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1728..2651
|
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
2-dehydropantoate 2-reductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNA6_9PROT
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6082_4
unknown
|
Not on your lists |
2682..2999
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_6082_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3011..4249
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000370391F
rbh
Phosphonoacetate hydrolase {ECO:0000313|EMBL:KJC61327.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
phosphonoacetate hydrolase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6082_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4281..5033)
|
Thiaminase II {ECO:0000313|EMBL:CDM24192.1}; EC=3.5.99.2 {ECO:0000313|EMBL:CDM24192.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
transcriptional activator TenA; K03707 thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
rbh
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI000373D80E
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6082_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5140..6204
|
Bll8057 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89BU1_BRADU
hypothetical protein
Bll8057 protein {ECO:0000313|EMBL:BAC53322.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
|
|
SCNpilot_expt_1000_bf_scaffold_6082_8
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6298..7056)
|
Porin n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ESG9_METSB
porin
Porin {ECO:0000313|EMBL:ACK49859.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
|
|
SCNpilot_expt_1000_bf_scaffold_6082_9
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7445..8227)
|
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30); K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
rbh
3-hydroxybutyrate dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035D02AB
rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:CCM76774.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
|
|
SCNpilot_expt_1000_bf_scaffold_6082_10
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8562..9296)
|
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
UPI0003CDD779 related cluster n=1 Tax=unknown RepID=UPI0003CDD779
rbh
carbonic anhydrase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6082_11
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9516..9953)
|
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037223DB
Preprotein translocase subunit TatC {ECO:0000313|EMBL:AHB48371.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
truncated hemoglobin-like protein
|
|
SCNpilot_expt_1000_bf_scaffold_6082_12
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9984..10439)
|
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00035F4B60
Uncharacterized protein {ECO:0000313|EMBL:AKH98804.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_6082_13
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10441..10773)
|
4Fe-4S ferredoxin n=1 Tax=Rhizobium loti RepID=UPI000361731B
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K05524 ferredoxin
Ferredoxin {ECO:0000313|EMBL:AHB47817.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
|
|
SCNpilot_expt_1000_bf_scaffold_6082_14
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10783..11238)
|
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B883_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56270.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_6082_15
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11342..11788
|
Rrf2 family transcriptional regulator n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SE94_9RHIZ
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:AHB48370.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
nsrR; HTH-type transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
|
|
SCNpilot_expt_1000_bf_scaffold_6082_16
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11814..12677)
|
LysR family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI000370540E
rbh
LysR family transcriptional regulator HdfR {ECO:0000313|EMBL:BAQ16592.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
HTH-type transcriptional regulator
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_6082_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12860..14467
|
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:CDX39933.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CDX39933.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ctaD; Cytochrome c oxidase subunit 1; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome c oxidase subunit 1 n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSY2_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_6082_18
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14501..15136
|
Transporter, Tim44 family protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FVB2_PELBH
Transporter, Tim44 family protein {ECO:0000313|EMBL:EAU48214.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
import inner membrane translocase subunit Tim44
|
|
SCNpilot_expt_1000_bf_scaffold_6082_19
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15180..15614)
|
Transcriptional regulator n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZ02_AZOBR
PAS sensor protein {ECO:0000313|EMBL:ETR75616.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
transcriptional regulator
|