ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6172

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6172_1
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..305)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JCH1_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65147.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_6172_2
unknown

Not on your lists

482..748
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6172_3
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

912..2681
DNA (1770bp) protein (590aa)
Putative dihydroxy-acid dehydratase {ECO:0000313|EMBL:CCQ75127.1}; EC=4.2.1.9 {ECO:0000313|EMBL:CCQ75127.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003810B20
SCNpilot_expt_1000_bf_scaffold_6172_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2966..4336)
DNA (1371bp) protein (457aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JSW2_HYPDA rbh
response regulator receiver modulated diguanylate cyclase; K02488 two-component system, cell cycle response regulator rbh
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:ADJ22447.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_expt_1000_bf_scaffold_6172_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4370..4825)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000368FE1E
response regulator receiver; K11443 two-component system, cell cycle response regulator DivK
Putative response regulator receiver {ECO:0000313|EMBL:CCB64351.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_6172_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4932..5246
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SF52_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AHB48675.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6172_7
unknown

Not on your lists

comp(6240..6488)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6172_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6675..7439)
DNA (765bp) protein (255aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
2-dehydropantoate 2-reductase n=3 Tax=Azospirillum brasilense Sp245 RepID=G8AGK5_AZOBR
2-dehydropantoate 2-reductase
SCNpilot_expt_1000_bf_scaffold_6172_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7687..8226)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VCD9_9RHIZ
Acetyltransferase, GNAT family {ECO:0000313|EMBL:CDN53961.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
putative acetyltransferase
SCNpilot_expt_1000_bf_scaffold_6172_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8318..10144)
DNA (1827bp) protein (609aa)
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] rbh
Dihydroxy-acid dehydratase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8B3_VARPE rbh
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:KFC63655.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_expt_1000_bf_scaffold_6172_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10258..10722
DNA (465bp) protein (155aa)
HPr kinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IZD5_9PROT
HPr kinase {ECO:0000313|EMBL:EKE68238.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ptsK; HPr kinase/phosphorylase
SCNpilot_expt_1000_bf_scaffold_6172_12
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11111..11887)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAT5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:AHB47891.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6172_13
unknown

Not on your lists

12097..12360
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying 13 items

View Taxonomy