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SCNpilot_expt_1000_bf_scaffold_6567

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6567_1
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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184..918
DNA (735bp) protein (245aa)
UPI0003CF0042 related cluster n=1 Tax=unknown RepID=UPI0003CF0042 rbh
Membrane protein {ECO:0000313|EMBL:ESZ41609.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6567_2
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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942..1565
DNA (624bp) protein (208aa)
UPI0003CFE27A related cluster n=1 Tax=unknown RepID=UPI0003CFE27A
Uncharacterized protein {ECO:0000313|EMBL:ESZ23408.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6567_3
unknown

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2092..2382
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6567_4
unknown

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2535..2891
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6567_5
unknown

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4204..4395
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6567_6
unknown

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4398..4736
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6567_7
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4685..5143
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003635D62
Energy transducer TonB {ECO:0000313|EMBL:KJR63923.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
tonB; Ferric siderophore transporter; K03832 periplasmic protein TonB
SCNpilot_expt_1000_bf_scaffold_6567_8
unknown

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5106..5201
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6567_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5288..5659)
DNA (372bp) protein (124aa)
FMN-dependent alpha-hydroxy acid dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15]
UPI0003CE16C0 related cluster n=1 Tax=unknown RepID=UPI0003CE16C0
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SCNpilot_expt_1000_bf_scaffold_6567_10
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5656..6291)
DNA (636bp) protein (212aa)
FMN-dependent alpha-hydroxy acid dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15]
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Pseudomonas mendocina DLHK RepID=J7SNC1_PSEME
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:ABP83572.1}; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain ymp).;"
SCNpilot_expt_1000_bf_scaffold_6567_11
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6371..6553)
DNA (183bp) protein (61aa)
FAD dependent oxidoreductase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q139Z4_RHOPS
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:KCZ85680.1}; TaxID=1280949 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas adhaerens MHS-3.;"
SCNpilot_expt_1000_bf_scaffold_6567_12
unknown

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comp(6704..6961)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6567_13
unknown

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comp(7035..7304)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6567_14
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7541..8260
DNA (720bp) protein (240aa)
Transcriptional regulator n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBJ3_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:AHB47847.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
winged helix family two component transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_6567_15
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8681..9211
DNA (531bp) protein (177aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Histidine kinase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAQ9_9RHIZ
Integral membrane sensor signal transduction histidine kinase
Displaying 15 items

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