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SCNpilot_expt_1000_bf_scaffold_2408_curated

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2408_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..674
DNA (672bp) protein (224aa)
Cytochrome o ubiquinol oxidase subunit III n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICR3_9BURK
cytochrome o ubiquinol oxidase subunit III
Cytochrome o ubiquinol oxidase subunit III {ECO:0000313|EMBL:AFU47066.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

777..1106
DNA (330bp) protein (110aa)
Cytochrome o ubiquinol oxidase subunit IV n=1 Tax=Acidovorax sp. KKS102 RepID=K0I288_9BURK
cytochrome o ubiquinol oxidase subunit IV
Cytochrome o ubiquinol oxidase subunit IV {ECO:0000313|EMBL:AFU47067.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1106..1924
DNA (819bp) protein (273aa)
Surfeit locus 1 family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW22_9BURK
surfeit locus 1 family protein
Surfeit locus 1 family protein {ECO:0000313|EMBL:AFU47068.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1899..3230
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I782_9BURK
integral membrane sensor signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_2408_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3884..4873)
DNA (990bp) protein (330aa)
Putative transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICR7_9BURK
transporter
Putative transporter {ECO:0000313|EMBL:AFU47071.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5142..7409)
DNA (2268bp) protein (756aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW26_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47073.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7701..10292)
DNA (2592bp) protein (864aa)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3)
Aconitate hydratase 2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I785_9BURK
SCNpilot_expt_1000_bf_scaffold_2408_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10382..11017)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3I4_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47075.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11050..12117)
DNA (1068bp) protein (356aa)
HpcH/HpaI aldolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICR9_9BURK
HpcH/HpaI aldolase
HpcH/HpaI aldolase {ECO:0000313|EMBL:AFU47076.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_10
unknown

Not on your lists

12295..12534
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2408_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13352..14140
DNA (789bp) protein (263aa)
GntR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW30_9BURK
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AFU47078.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14274..14708
DNA (435bp) protein (145aa)
Succinate dehydrogenase subunit C n=1 Tax=Acidovorax sp. KKS102 RepID=K0I789_9BURK
succinate dehydrogenase subunit C
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:AFU47079.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14772..15137
DNA (366bp) protein (122aa)
Succinate dehydrogenase subunit D n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3I8_9BURK
succinate dehydrogenase subunit D
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:AFU47080.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15160..16968
DNA (1809bp) protein (603aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICS3_9BURK
succinate dehydrogenase flavoprotein subunit
SCNpilot_expt_1000_bf_scaffold_2408_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16991..17695
DNA (705bp) protein (235aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Succinate dehydrogenase subunit B n=1 Tax=Acidovorax sp. KKS102 RepID=K0I299_9BURK
succinate dehydrogenase subunit B
SCNpilot_expt_1000_bf_scaffold_2408_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17729..18055
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW34_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47083.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18115..19425
DNA (1311bp) protein (437aa)
gltA; type II citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Citrate synthase n=2 Tax=Acidovorax RepID=K0I790_9BURK
SCNpilot_expt_1000_bf_scaffold_2408_curated_18
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19646..19912
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C149_9BURK
Regulator {ECO:0000313|EMBL:KJA10837.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2408_curated_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19970..20164
DNA (195bp) protein (65aa)
S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
S-(hydroxymethyl)glutathione dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375840
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_2408_curated_20
Arundo donax, Arundo, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(20388..20579)
DNA (192bp) protein (64aa)
hypothetical protein id=12551131 bin=BDI species=Streptomyces bottropensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BDI organism_group=Betaproteobacteria
ADHX {ECO:0000313|EMBL:JAE87635.1}; TaxID=35708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Arundinoideae; Arundineae; Arundo.;" source="Arundo donax (Giant reed) (Donax arundinaceus).;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_21
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20855..21106
DNA (252bp) protein (84aa)
S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
S-(Hydroxymethyl)glutathione dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3J8_9BURK
SCNpilot_expt_1000_bf_scaffold_2408_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21373..22152
DNA (780bp) protein (260aa)
S-formylglutathione hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICT0_9BURK
s-formylglutathione hydrolase
S-formylglutathione hydrolase {ECO:0000313|EMBL:AFU47091.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22470..23900
DNA (1431bp) protein (477aa)
Sulfatase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2A6_9BURK
sulfatase
Sulfatase {ECO:0000313|EMBL:AFU47092.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23950..24603)
DNA (654bp) protein (218aa)
PIG3 family NAD(P)H quinone oxidoreductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW42_9BURK
PIG3 family NAD(P)H quinone oxidoreductase
PIG3 family NAD(P)H quinone oxidoreductase {ECO:0000313|EMBL:AFU47093.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25123..25992
DNA (870bp) protein (290aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I796_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU47094.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26107..26394
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3K0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47095.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_27
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26493..27746)
DNA (1254bp) protein (418aa)
radical SAM protein n=1 Tax=Acidovorax radicis RepID=UPI00023754D6
Radical SAM protein {ECO:0000313|EMBL:KJA10858.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
radical SAM domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2408_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27951..29153
DNA (1203bp) protein (401aa)
Rh family protein/ammonium transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7C4_9BURK
Rh family protein/ammonium transporter
Rh family protein/ammonium transporter {ECO:0000313|EMBL:AFU47124.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2408_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29313..31217
DNA (1905bp) protein (635aa)
Phospholipase d/transphosphatidylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3M6_9BURK
Phospholipase d/transphosphatidylase {ECO:0000313|EMBL:AFU47125.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
phospholipase d/transphosphatidylase
SCNpilot_expt_1000_bf_scaffold_2408_curated_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31223..32200)
DNA (978bp) protein (326aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
tRNA-dihydrouridine synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICU9_9BURK
dihydrouridine synthase
Displaying items 1-30 of 39 in total

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