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SCNpilot_expt_1000_bf_scaffold_1410_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1410_curated_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..810
DNA (810bp) protein (270aa)
Magnesium/cobalt transport protein CorA n=1 Tax=Variovorax paradoxus B4 RepID=T1X5L6_VARPD
corA1; magnesium/cobalt transport protein CorA
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_expt_1000_bf_scaffold_1410_curated_2
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(903..1517)
DNA (615bp) protein (205aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000316830D
putative MTA/SAH nucleosidase
SCNpilot_expt_1000_bf_scaffold_1410_curated_3
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2651..2893
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS57733.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
SCNpilot_expt_1000_bf_scaffold_1410_curated_4
unknown

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2969..3232
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1410_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3517..4929)
DNA (1413bp) protein (471aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA78_9BURK
NAD(P)(+) transhydrogenase
SCNpilot_expt_1000_bf_scaffold_1410_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4965..5333)
DNA (369bp) protein (123aa)
pntA; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha {ECO:0000256|PIRNR:PIRNR000203}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000203};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
NAD(P) transhydrogenase subunit alpha n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6I2_9BURK
SCNpilot_expt_1000_bf_scaffold_1410_curated_7
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5650..5799
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS57928.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
SCNpilot_expt_1000_bf_scaffold_1410_curated_8
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6572..7306)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFR2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJA10127.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1410_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7624..8688)
DNA (1065bp) protein (355aa)
Fructose-bisphosphate aldolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4T8_9BURK
fructose-bisphosphate aldolase
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:AFU48212.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1410_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8780..10171)
DNA (1392bp) protein (464aa)
Histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYJ1_9BURK
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AFU48213.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1410_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10168..10893)
DNA (726bp) protein (242aa)
Two component transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA82_9BURK
two component transcriptional regulator
Two component transcriptional regulator {ECO:0000313|EMBL:AFU48214.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1410_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10965..11717
DNA (753bp) protein (251aa)
PAP2 (Acid phosphatase) superfamily protein-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6I4_9BURK
PAP2 (acid phosphatase) superfamily protein-like protein
PAP2 (Acid phosphatase) superfamily protein-like protein {ECO:0000313|EMBL:AFU48215.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1410_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11710..12273
DNA (564bp) protein (188aa)
Phosphoesterase PA-phosphatase-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFR6_9BURK
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:AFU48216.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1410_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12338..13780)
DNA (1443bp) protein (481aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Pyruvate kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4U2_9BURK
SCNpilot_expt_1000_bf_scaffold_1410_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13882..14667)
DNA (786bp) protein (262aa)
Abortive infection protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYJ5_9BURK
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:AFU48218.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1410_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14682..16079)
DNA (1398bp) protein (466aa)
Peptidase m24 n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA84_9BURK
peptidase m24
Peptidase m24 {ECO:0000313|EMBL:AFU48219.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1410_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16076..16852)
DNA (777bp) protein (259aa)
Nucleotidyl transferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6I7_9BURK
nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:AFU48220.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1410_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16849..17238)
DNA (390bp) protein (130aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S-adenosylmethionine decarboxylase-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFR9_9BURK
S-adenosylmethionine decarboxylase-like protein
SCNpilot_expt_1000_bf_scaffold_1410_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17547..19415
DNA (1869bp) protein (623aa)
Transketolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4U6_9BURK
Transketolase {ECO:0000313|EMBL:AFU48222.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
transketolase
SCNpilot_expt_1000_bf_scaffold_1410_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19504..19914
DNA (411bp) protein (137aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYK1_9BURK
glyceraldehyde-3-phosphate dehydrogenase
SCNpilot_expt_1000_bf_scaffold_1410_curated_21
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19896..20195
DNA (300bp) protein (100aa)
Glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=1 Tax=Acidovorax delafieldii RepID=A9UE98_ACIDE
glyceraldehyde-3-phosphate dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying 21 items

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