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SCNpilot_expt_1000_bf_scaffold_1102_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1102_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2547)
DNA (2547bp) protein (849aa)
Nitrate reductase subunit alpha n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYX0_9BURK
Nitrate reductase subunit alpha {ECO:0000313|EMBL:AFU44194.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
nitrate reductase subunit alpha
SCNpilot_expt_1000_bf_scaffold_1102_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2498..3622)
DNA (1125bp) protein (375aa)
Nitrate reductase subunit alpha n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYX0_9BURK
nitrate reductase subunit alpha
Nitrate reductase subunit alpha {ECO:0000313|EMBL:AFU44194.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_3

Not on your lists

3799..4164
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DJP7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98197.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_4

Not on your lists

4228..4662
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CYW2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98200.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5067..6359)
DNA (1293bp) protein (431aa)
Major facilitator superfamily protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HU37_9BURK
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:AFU44192.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6579..7301)
DNA (723bp) protein (241aa)
Two component LuxR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5L6_9BURK
two component LuxR family transcriptional regulator
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:AFU44191.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7298..8458)
DNA (1161bp) protein (387aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWF9_9BURK
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:AFU44190.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_8
unknown

Not on your lists

8722..9285
DNA (564bp) protein (188aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1102_curated_9
unknown

Not on your lists

comp(9754..9984)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1102_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10282..12603)
DNA (2322bp) protein (774aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMK5_9BURK
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AFU44188.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12676..13524
DNA (849bp) protein (283aa)
purU; formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Formyltetrahydrofolate deformylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HU34_9BURK
SCNpilot_expt_1000_bf_scaffold_1102_curated_12
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13538..14443
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. NO-1 RepID=H0C485_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EHL20599.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
LysR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1102_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14716..16215
DNA (1500bp) protein (500aa)
FAD-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002377BF0
FAD linked oxidase domain-containing protein
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:AFU44185.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16221..16580
DNA (360bp) protein (120aa)
LrgA protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYW1_9BURK
LrgA protein
LrgA protein {ECO:0000313|EMBL:AFU44184.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16564..17289
DNA (726bp) protein (242aa)
LrgB family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMK1_9BURK
LrgB family protein
LrgB family protein {ECO:0000313|EMBL:AFU44183.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17350..18645)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HU30_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44182.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18679..19818)
DNA (1140bp) protein (380aa)
Class V aminotransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5K9_9BURK
class V aminotransferase
Class V aminotransferase {ECO:0000313|EMBL:AFU44181.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19907..20716
DNA (810bp) protein (270aa)
AraC family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWF0_9BURK
araC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AFU44180.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20816..21427
DNA (612bp) protein (204aa)
RhtB family transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYV8_9BURK
RhtB family transporter
RhtB family transporter {ECO:0000313|EMBL:AFU44179.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21447..24734)
DNA (3288bp) protein (1096aa)
Carbamoyl-phosphate synthase L chain, ATP-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMJ6_9BURK
carbamoyl-phosphate synthase ATP-binding subunit L
Carbamoyl-phosphate synthase L chain, ATP-binding protein {ECO:0000313|EMBL:AFU44178.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_21
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24807..26417)
DNA (1611bp) protein (537aa)
AMP-dependent synthetase n=1 Tax=Acidovorax radicis RepID=UPI0002377BF6
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_1102_curated_22
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26562..27212
DNA (651bp) protein (217aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377BF7
TetR family transcriptional regulator
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1102_curated_23
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27266..28513
DNA (1248bp) protein (416aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002377BF8
extracellular ligand-binding receptor
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1102_curated_24
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(28571..28798)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Nocardiopsis sp. CNS639 RepID=UPI00036271C0
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
SCNpilot_expt_1000_bf_scaffold_1102_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29018..29692
DNA (675bp) protein (225aa)
Threonine aldolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYV2_9BURK
threonine aldolase
Threonine aldolase {ECO:0000313|EMBL:AFU44174.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29699..30418)
DNA (720bp) protein (240aa)
Alanine racemase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMJ4_9BURK
alanine racemase domain-containing protein
Alanine racemase domain-containing protein {ECO:0000313|EMBL:AFU44173.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_27
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30456..31499
DNA (1044bp) protein (348aa)
Twitching motility protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HU22_9BURK
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:AFU44172.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31567..32202
DNA (636bp) protein (212aa)
Putative Crp/Fnr family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5K3_9BURK
Crp/Fnr family transcriptional regulator
Putative Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:AFU44171.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32261..33397
DNA (1137bp) protein (379aa)
Twitching motility protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWE2_9BURK
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:AFU44170.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1102_curated_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33497..34411
DNA (915bp) protein (305aa)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYU6_9BURK
3-hydroxyisobutyrate dehydrogenase
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:AFU44169.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying items 1-30 of 40 in total

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