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SCNpilot_expt_1000_bf_scaffold_6890_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6890_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..512
DNA (510bp) protein (170aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3E9_9BURK
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:AFU47597.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_6890_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

742..2316
DNA (1575bp) protein (525aa)
garD; galactarate dehydratase (EC:4.2.1.42)
Galactarate dehydrogenase {ECO:0000313|EMBL:AFU47596.1}; EC=4.2.1.42 {ECO:0000313|EMBL:AFU47596.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Galactarate dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IE25_9BURK
SCNpilot_expt_1000_bf_scaffold_6890_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2398..3327
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4Y3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47595.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_6890_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4181..4441
DNA (261bp) protein (87aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Aldose 1-epimerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8P2_9BURK
aldose 1-epimerase
SCNpilot_expt_1000_bf_scaffold_6890_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4515..5450
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX96_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47593.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_6890_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5659..7182
DNA (1524bp) protein (508aa)
Protease Do n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3E7_9BURK
protease Do
Protease Do {ECO:0000313|EMBL:AFU47592.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_6890_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7234..8253)
DNA (1020bp) protein (340aa)
Family 1 extracellular solute-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IE20_9BURK
family 1 extracellular solute-binding protein
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:AFU47591.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_6890_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8457..9116
DNA (660bp) protein (220aa)
Winged helix family two component transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4X8_9BURK
winged helix family two component transcriptional regulator
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:AFU47590.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_6890_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9116..10465
DNA (1350bp) protein (450aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8N9_9BURK
histidine kinase
SCNpilot_expt_1000_bf_scaffold_6890_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10694..11686
DNA (993bp) protein (331aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
2-dehydropantoate 2-reductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX95_9BURK
2-dehydropantoate 2-reductase
SCNpilot_expt_1000_bf_scaffold_6890_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11707..12198)
DNA (492bp) protein (164aa)
AsnC family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3E4_9BURK
asnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:AFU47587.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_6890_curated_12
unknown

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comp(12292..12567)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6890_curated_13
unknown

Not on your lists

comp(12571..12693)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6890_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12766..13188
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IE18_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47586.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_6890_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13326..13727
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4X5_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47585.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_6890_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13977..16967)
DNA (2991bp) protein (997aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8N5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AFU47584.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6890_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16907..17632)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8N5_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47584.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 17 items

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