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SCNpilot_expt_1000_bf_scaffold_4526_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4526_curated_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..499)
DNA (498bp) protein (166aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3G2_ACISJ
SCNpilot_expt_1000_bf_scaffold_4526_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(574..1434)
DNA (861bp) protein (287aa)
Short chain dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWU7_9BURK
short chain dehydrogenase
Short chain dehydrogenase {ECO:0000313|EMBL:AFU44340.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_3
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1708..2526
DNA (819bp) protein (273aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS64077.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
id=12552843 bin=BDI tax=BDI organism_group=Betaproteobacteria
SCNpilot_expt_1000_bf_scaffold_4526_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2749..3342
DNA (594bp) protein (198aa)
Poly granule associated protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZG7_9BURK
poly granule associated protein
Poly granule associated protein {ECO:0000313|EMBL:AFU44339.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3572..4234
DNA (663bp) protein (221aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMW1_9BURK
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AFU44338.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4291..5067
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUD1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44337.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5259..6026)
DNA (768bp) protein (256aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Type III pantothenate kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5X6_9BURK
SCNpilot_expt_1000_bf_scaffold_4526_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6201..6689
DNA (489bp) protein (163aa)
Peptidoglycan-binding LysM n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWU2_9BURK
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:AFU44335.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6766..7182)
DNA (417bp) protein (139aa)
Rhodanese domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZF5_9BURK
rhodanese domain-containing protein
Rhodanese domain-containing protein {ECO:0000313|EMBL:AFU44334.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7199..7978)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMV7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44333.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8297..9007)
DNA (711bp) protein (237aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUC7_9BURK
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AFU44332.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9138..9743)
DNA (606bp) protein (202aa)
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5X0_9BURK
histidinol-phosphate phosphatase family protein
Histidinol-phosphate phosphatase family protein {ECO:0000313|EMBL:AFU44331.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9791..11968)
DNA (2178bp) protein (726aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
glyS; glycyl-tRNA ligase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWT5_9BURK
SCNpilot_expt_1000_bf_scaffold_4526_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11965..12633)
DNA (669bp) protein (223aa)
glyQ; glycyl-tRNA ligase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Glycine--tRNA ligase alpha subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZE7_9BURK
SCNpilot_expt_1000_bf_scaffold_4526_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13177..14253)
DNA (1077bp) protein (359aa)
L-asparaginase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMV3_9BURK
L-asparaginase
L-asparaginase {ECO:0000313|EMBL:AFU44328.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14462..15379
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUC3_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU44327.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15482..16705)
DNA (1224bp) protein (408aa)
Beta-ketoacyl synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5W7_9BURK
beta-ketoacyl synthase
Beta-ketoacyl synthase {ECO:0000313|EMBL:AFU44326.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16702..17223)
DNA (522bp) protein (174aa)
3-hydroxydecanoyl-ACP dehydratase (EC:4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064166};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
3-hydroxydecanoyl-(Acyl carrier protein) dehydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWS9_9BURK
SCNpilot_expt_1000_bf_scaffold_4526_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17340..18974)
DNA (1635bp) protein (545aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00250216}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000256|SAAS:SAAS00088950};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Apolipoprotein N-acyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZD9_9BURK
lnt; apolipoprotein N-acyltransferase
SCNpilot_expt_1000_bf_scaffold_4526_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18974..19858)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMV0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44323.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_4526_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19965..20705)
DNA (741bp) protein (247aa)
GCN5-like N-acetyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUC0_9BURK
N-acetyltransferase GCN5
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AFU44322.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 21 items

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