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SCNpilot_expt_1000_bf_scaffold_1984_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1984_curated_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1183)
DNA (1182bp) protein (394aa)
AMP-dependent synthetase and ligase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0W8_9BURK
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EHL21623.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
AMP-dependent synthetase and ligase
SCNpilot_expt_1000_bf_scaffold_1984_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1286..1726)
DNA (441bp) protein (147aa)
Diguanylate cyclase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZR8_9BURK
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AFU45360.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_3
unknown

Not on your lists

1921..2307
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1984_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2956..4062)
DNA (1107bp) protein (369aa)
Extracellular solute-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2A7_9BURK
extracellular solute-binding protein
Extracellular solute-binding protein {ECO:0000313|EMBL:AFU45359.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4153..5742
DNA (1590bp) protein (530aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
DNA primase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQN0_9BURK
DNA primase
SCNpilot_expt_1000_bf_scaffold_1984_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5739..6173
DNA (435bp) protein (145aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
DNA primase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQN0_9BURK
DNA primase
SCNpilot_expt_1000_bf_scaffold_1984_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6440..8818
DNA (2379bp) protein (793aa)
RNA polymerase sigma factor RpoD n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWS2_9BURK
RpoD family RNA polymerase sigma factor
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9163..10191
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8I7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45356.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10241..11815
DNA (1575bp) protein (525aa)
Methyl-accepting chemotaxis transmembrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZR5_9BURK
methyl-accepting chemotaxis transmembrane protein
Methyl-accepting chemotaxis transmembrane protein {ECO:0000313|EMBL:AFU45355.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12020..13057)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2A3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45354.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13136..14353)
DNA (1218bp) protein (406aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQM6_9BURK
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:AFU45353.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14378..15433)
DNA (1056bp) protein (352aa)
Pyruvate carboxyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWR8_9BURK
pyruvate carboxyltransferase
Pyruvate carboxyltransferase {ECO:0000313|EMBL:AFU45352.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15475..16377
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8I4_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU45351.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16583..16891
DNA (309bp) protein (103aa)
Putative transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZR1_9BURK
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFU45350.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_15
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17046..17405
DNA (360bp) protein (120aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0X8_9BURK
peptidyl-prolyl isomerase
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1984_curated_16
unknown

Not on your lists

17843..18115
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1984_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18136..19533)
DNA (1398bp) protein (466aa)
Na+/solute symporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWR2_9BURK
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:AFU45347.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20194..20538)
DNA (345bp) protein (115aa)
Membrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8I0_9BURK
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AFU45346.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20615..23005)
DNA (2391bp) protein (797aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Phosphoenolpyruvate synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZQ7_9BURK
SCNpilot_expt_1000_bf_scaffold_1984_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23271..24092
DNA (822bp) protein (274aa)
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00160002};; EC=2.7.4.28 {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00159999};; Pyruvate, water dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; TaxID=358220 species="Bacteria
Putative phosphoenolpyruvate synthase regulatory protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I291_9BURK
PEP synthetase regulatory protein
SCNpilot_expt_1000_bf_scaffold_1984_curated_21
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24328..24726)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377FA4
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_1984_curated_22
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24799..27918)
DNA (3120bp) protein (1040aa)
multidrug transporter AcrB n=1 Tax=Acidovorax radicis RepID=UPI0002377FA3
CzcA family heavy metal efflux pump; K07239 heavy-metal exporter, HME family
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1984_curated_23
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27931..29052)
DNA (1122bp) protein (374aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002377FA2
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_1984_curated_24
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29049..29630)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377FA1
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_1984_curated_25
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29658..30215)
DNA (558bp) protein (186aa)
Outer membrane protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KN52_9BURK
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_1984_curated_26
unknown

Not on your lists

30480..31406
DNA (927bp) protein (309aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1984_curated_27
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31590..33203)
DNA (1614bp) protein (538aa)
Alkyl hydroperoxide reductase subunit F n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQL7_9BURK
alkyl hydroperoxide reductase subunit F
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:AFU45343.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_28
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33358..33852)
DNA (495bp) protein (165aa)
Alkyl hydroperoxide reductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWQ9_9BURK
alkyl hydroperoxide reductase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_1984_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34218..34694
DNA (477bp) protein (159aa)
Bacterioferritin n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8H6_9BURK
bacterioferritin
Bacterioferritin {ECO:0000256|RuleBase:RU000623}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1984_curated_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35139..35447
DNA (309bp) protein (103aa)
Putative iron uptake protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZQ4_9BURK
iron uptake protein
Putative iron uptake protein {ECO:0000313|EMBL:AFU45340.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying items 1-30 of 42 in total

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