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SCNpilot_expt_1000_bf_scaffold_910_curated

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_910_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..264)
DNA (264bp) protein (88aa)
AmpG permease n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTT3_9BURK
AmpG permease
AmpG permease {ECO:0000313|EMBL:AFU44037.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

595..1251
DNA (657bp) protein (219aa)
Peptidase M48, Ste24p n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMA6_9BURK
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:AFU44038.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1435..2580)
DNA (1146bp) protein (382aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KDW6_9BURK
diguanylate cyclase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_910_curated_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2782..3420)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377533
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_910_curated_5
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3582..4199)
DNA (618bp) protein (206aa)
Chemotaxis protein CheC, inhibitor of MCP methylation n=1 Tax=Acidovorax sp. CF316 RepID=J1EDC3_9BURK
Chemotaxis protein CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:EJE50274.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
CheC domain-containing protein; K03410 chemotaxis protein CheC
SCNpilot_expt_1000_bf_scaffold_910_curated_6
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4201..4563)
DNA (363bp) protein (121aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Acidovorax sp. CF316 RepID=J1ED92_9BURK
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EJE50356.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
response regulator receiver protein
SCNpilot_expt_1000_bf_scaffold_910_curated_7
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4587..6248)
DNA (1662bp) protein (554aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Acidovorax sp. CF316 RepID=J0K9S4_9BURK
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJE50355.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
putative two-component response regulator
SCNpilot_expt_1000_bf_scaffold_910_curated_8
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6229..6777)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EDK3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE50354.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_910_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6974..8881)
DNA (1908bp) protein (636aa)
Type II secretion system protein E n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYG9_9BURK
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AFU44044.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8907..9710)
DNA (804bp) protein (268aa)
Exodeoxyribonuclease III Xth n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW31_9BURK
exodeoxyribonuclease III Xth
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:AFU44045.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9721..10419
DNA (699bp) protein (233aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Orotate phosphoribosyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5B3_9BURK
SCNpilot_expt_1000_bf_scaffold_910_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10425..11123
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTT8_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44047.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11230..12678)
DNA (1449bp) protein (483aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMB2_9BURK
glutamyl-tRNA(Gln) amidotransferase subunit B
SCNpilot_expt_1000_bf_scaffold_910_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12680..14173)
DNA (1494bp) protein (498aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYH5_9BURK
SCNpilot_expt_1000_bf_scaffold_910_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14186..14485)
DNA (300bp) protein (100aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW37_9BURK
glutamyl-tRNA(Gln) amidotransferase subunit C
SCNpilot_expt_1000_bf_scaffold_910_curated_16
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14693..15736
DNA (1044bp) protein (348aa)
Rod shape-determining protein MreB n=2 Tax=Acidovorax RepID=K0I5B5_9BURK
rod shape-determining protein MreB
Rod shape-determining protein MreB {ECO:0000313|EMBL:EHL20312.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15869..16792
DNA (924bp) protein (308aa)
Cell shape-determining protein MreC n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTU2_9BURK
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16836..17354
DNA (519bp) protein (173aa)
Putative rod shape-determining MreD transmembrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMB5_9BURK
rod shape-determining MreD transmembrane protein
Putative rod shape-determining MreD transmembrane protein {ECO:0000313|EMBL:AFU44053.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17436..19376
DNA (1941bp) protein (647aa)
Peptidoglycan glycosyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYH8_9BURK
peptidoglycan glycosyltransferase
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AFU44054.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19461..20348)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW41_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44055.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20428..21183)
DNA (756bp) protein (252aa)
Phosphonate-transporting ATPase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5B8_9BURK
phosphonate-transporting ATPase
Phosphonate-transporting ATPase {ECO:0000313|EMBL:AFU44056.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21180..21962)
DNA (783bp) protein (261aa)
Polar amino acid ABC transporter permease n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTU5_9BURK
polar amino acid ABC transporter permease
Polar amino acid ABC transporter permease {ECO:0000313|EMBL:AFU44057.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22094..22858)
DNA (765bp) protein (255aa)
Extracellular solute-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMC0_9BURK
extracellular solute-binding protein
Extracellular solute-binding protein {ECO:0000313|EMBL:AFU44058.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23121..23864)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYI3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44059.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24398..25750
DNA (1353bp) protein (451aa)
Ammonium transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW46_9BURK
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25829..26158
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5C2_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44061.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_27
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26195..26395)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HTU7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44062.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26827..28518)
DNA (1692bp) protein (564aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMC1_9BURK
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:AFU44063.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28805..29929
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYI7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44064.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_910_curated_30

Not on your lists

comp(29910..30701)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DMF0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD99207.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying items 1-30 of 45 in total

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