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SCNpilot_expt_1000_bf_scaffold_5330_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5330_curated_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

895..1068
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BYA7_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL22558.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1121..1555)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HP18_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44718.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_3
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1876..2556)
DNA (681bp) protein (227aa)
urease accessory protein UreG n=1 Tax=Acidovorax radicis RepID=UPI0002377461
urease accessory protein UreG
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_5330_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2607..3317)
DNA (711bp) protein (237aa)
Urease accessory protein UreF n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVA2_9BURK
urease accessory protein UreF
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4097..4576)
DNA (480bp) protein (160aa)
GCN5-related N-acetyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8J1_ACIDE
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EER59207.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
N-acetyltransferase GCN5
SCNpilot_expt_1000_bf_scaffold_5330_curated_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4588..6306)
DNA (1719bp) protein (573aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
ureC; urease subunit alpha (EC:3.5.1.5)
Urease subunit alpha n=2 Tax=Acidovorax RepID=C5T8J0_ACIDE
SCNpilot_expt_1000_bf_scaffold_5330_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6400..6705)
DNA (306bp) protein (102aa)
urease subunit beta id=12553876 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
urease subunit beta
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_5330_curated_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6767..7381)
DNA (615bp) protein (205aa)
HupE/UreJ protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVA5_9BURK
HupE/UreJ protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_5330_curated_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7424..7786)
DNA (363bp) protein (121aa)
ureA; urease subunit gamma (EC:3.5.1.5)
Urease subunit gamma n=1 Tax=Acidovorax sp. KKS102 RepID=K0HP28_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_5330_curated_10
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8110..8325)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS62590.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_11
unknown

Not on your lists

comp(8746..8892)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5330_curated_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9034..9450)
DNA (417bp) protein (139aa)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_expt_1000_bf_scaffold_5330_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9594..11534
DNA (1941bp) protein (647aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Q7_9BURK
integral membrane sensor hybrid histidine kinase
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:AFU44729.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11534..12604
DNA (1071bp) protein (357aa)
Response regulator receiver protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY41_9BURK
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AFU44730.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_15
unknown

Not on your lists

13304..13405
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5330_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13546..15579
DNA (2034bp) protein (678aa)
Magnesium-transporting ATPase MgtA {ECO:0000313|EMBL:AFU44732.1}; EC=3.6.3.2 {ECO:0000313|EMBL:AFU44732.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
magnesium-transporting ATPase MgtA (EC:3.6.3.2)
Magnesium-transporting ATPase MgtA n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVB0_9BURK
SCNpilot_expt_1000_bf_scaffold_5330_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15528..16241
DNA (714bp) protein (238aa)
magnesium-transporting ATPase MgtA (EC:3.6.3.2)
Magnesium-transporting ATPase MgtA {ECO:0000313|EMBL:AFU44732.1}; EC=3.6.3.2 {ECO:0000313|EMBL:AFU44732.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Magnesium-transporting ATPase MgtA n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVB0_9BURK
SCNpilot_expt_1000_bf_scaffold_5330_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16267..16593)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HP32_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44733.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16801..17487)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0R1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44734.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17655..18839
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY46_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44735.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_21
unknown

Not on your lists

comp(18812..19072)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5330_curated_22
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19208..19762)
DNA (555bp) protein (185aa)
Uncharacterised protein {ECO:0000313|EMBL:CRE12040.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_23
unknown

Not on your lists

20182..20430
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5330_curated_24
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20423..22693)
DNA (2271bp) protein (757aa)
Putative isoquinoline 1-oxidoreductase subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0HP34_9BURK
Putative isoquinoline 1-oxidoreductase subunit beta {ECO:0000313|EMBL:AFU44738.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
isoquinoline 1-oxidoreductase subunit beta
SCNpilot_expt_1000_bf_scaffold_5330_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23196..23483)
DNA (288bp) protein (96aa)
Major facilitator superfamily transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0R6_9BURK
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:AFU44739.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_26
unknown

Not on your lists

23553..23702
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5330_curated_27
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24790..25110)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NBZ2_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC28024.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus 3016.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25707..25979
DNA (273bp) protein (91aa)
Twin-arginine translocation pathway signal protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY51_9BURK
twin-arginine translocation pathway signal protein
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:AFU44740.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5330_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26074..27006
DNA (933bp) protein (311aa)
Inner-membrane translocator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I714_9BURK
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AFU44741.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 29 items

View Taxonomy