ggKbase home page

SCNpilot_expt_1000_bf_scaffold_12500_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12500_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..466)
DNA (465bp) protein (155aa)
Diguanylate cyclase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9Y3_9BURK
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AFU45926.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_12500_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(558..2141)
DNA (1584bp) protein (528aa)
Sulfate transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYD1_9BURK
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:AFU45927.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_12500_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2425..2910
DNA (486bp) protein (162aa)
Transport protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HSI1_9BURK
transporter
Transport protein {ECO:0000313|EMBL:AFU45928.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_12500_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3267..4250
DNA (984bp) protein (328aa)
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme n=1 Tax=Acidovorax sp. KKS102 RepID=K0I457_9BURK
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme {ECO:0000313|EMBL:AFU45929.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_12500_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4345..5214
DNA (870bp) protein (290aa)
Integral membrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Y8_9BURK
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AFU45930.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_12500_curated_6
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5532..5711
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WNC5_VEREI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_12500_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5731..6219)
DNA (489bp) protein (163aa)
Arylesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9Y9_9BURK
arylesterase
Arylesterase {ECO:0000313|EMBL:AFU45931.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_12500_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6402..6962
DNA (561bp) protein (187aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYD7_9BURK
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:AFU45932.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_12500_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6902..7081
DNA (180bp) protein (60aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYD7_9BURK
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:AFU45932.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_12500_curated_10
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7200..7946
DNA (747bp) protein (249aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Acidovorax sp. KKS102 RepID=K0HSI7_9BURK
TrmH family RNA methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_12500_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7981..8706
DNA (726bp) protein (242aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
NAD-dependent protein deacylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I464_9BURK
silent information regulator protein sir2
SCNpilot_expt_1000_bf_scaffold_12500_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8871..10037
DNA (1167bp) protein (389aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0Z7_9BURK
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AFU45935.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_12500_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10129..10863)
DNA (735bp) protein (245aa)
NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9Z3_9BURK
NADP-dependent oxidoreductase domain-containing protein
NADP-dependent oxidoreductase domain-containing protein {ECO:0000313|EMBL:AFU45936.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 13 items

View Taxonomy