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SCNpilot_expt_1000_bf_scaffold_1654_curated

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1654_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..838
DNA (837bp) protein (279aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX06_9BURK
integral membrane sensor signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_1654_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1055..1717
DNA (663bp) protein (221aa)
Division inhibitor protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I617_9BURK
slmA; division inhibitor protein
Division inhibitor protein {ECO:0000313|EMBL:AFU44376.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1866..2594
DNA (729bp) protein (243aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUG6_9BURK
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AFU44377.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2599..4395
DNA (1797bp) protein (599aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HMZ7_9BURK
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AFU44378.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4441..4878
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZM0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44379.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4946..7348
DNA (2403bp) protein (801aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX13_9BURK
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AFU44380.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_7
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7360..7869
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375F74
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24513.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1654_curated_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7882..9081
DNA (1200bp) protein (400aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
acetyl-CoA acetyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002375F73
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1654_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9295..10182
DNA (888bp) protein (296aa)
Putative hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN03_9BURK
hydrolase
Putative hydrolase {ECO:0000313|EMBL:AFU44383.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10210..11070
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZN0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44384.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11146..11922
DNA (777bp) protein (259aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:AFU44385.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AFU44385.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Enoyl-CoA hydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX21_9BURK
SCNpilot_expt_1000_bf_scaffold_1654_curated_12
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12077..12829
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI0003000992
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_1654_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12920..13657
DNA (738bp) protein (246aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I627_9BURK
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AFU44386.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_14
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13686..14615
DNA (930bp) protein (310aa)
2,4-dienoyl-CoA reductase n=1 Tax=Acidovorax radicis RepID=UPI0002375F6E
short-chain dehydrogenase/reductase sdr
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_1654_curated_15
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14612..16225
DNA (1614bp) protein (538aa)
Propionyl-CoA carboxylase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT25_9BURK
Propionyl-CoA carboxylase {ECO:0000313|EMBL:EHL24519.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
carboxyl transferase
SCNpilot_expt_1000_bf_scaffold_1654_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16280..17458
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX28_9BURK
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AFU44390.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17460..18269
DNA (810bp) protein (270aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I635_9BURK
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AFU44391.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18379..20313
DNA (1935bp) protein (645aa)
Carbamoyl-phosphate synthase L chain, ATP-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUH9_9BURK
carbamoyl-phosphate synthase ATP-binding subunit L
Carbamoyl-phosphate synthase L chain, ATP-binding protein {ECO:0000313|EMBL:AFU44392.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_19
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20310..21482
DNA (1173bp) protein (391aa)
acyl-CoA dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375F68
acyL-CoA dehydrogenase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_1654_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21497..22384
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZQ1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44394.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_21
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22569..23690
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) IPR6_RHOCS">RepID=B6IPR6_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI99768.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_expt_1000_bf_scaffold_1654_curated_22
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23735..24052
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375F67
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_1654_curated_23
unknown

Not on your lists

comp(24183..24446)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375F66
SCNpilot_expt_1000_bf_scaffold_1654_curated_24

Not on your lists

24828..25208
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375F65
Putative integron gene cassette protein {ECO:0000313|EMBL:CAS02458.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1654_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25224..25640)
DNA (417bp) protein (139aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375F64
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AFU44397.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 25 items

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