ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8873_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8873_curated_1
unknown

Not on your lists

comp(156..284)
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8873_curated_2
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317..913)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000346EB43
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_8873_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(916..2772)
DNA (1857bp) protein (619aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
glutaminyl-tRNA ligase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICI7_9BURK
SCNpilot_expt_1000_bf_scaffold_8873_curated_4
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3398..3850
DNA (453bp) protein (151aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
3-dehydroquinate dehydratase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WK90_VEREI
SCNpilot_expt_1000_bf_scaffold_8873_curated_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3801..4256
DNA (456bp) protein (152aa)
Class I peptide chain release factor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3E7_ACIDE
Class I peptide chain release factor {ECO:0000313|EMBL:EER60998.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
class i peptide chain release factor; K15034 ribosome-associated protein
SCNpilot_expt_1000_bf_scaffold_8873_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4360..5181
DNA (822bp) protein (274aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3E6_ACIDE
extradiol ring-cleavage dioxygenase III subunit B
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_8873_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5234..5902
DNA (669bp) protein (223aa)
Phospholipase/carboxylesterase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT65_9BURK
phospholipase/carboxylesterase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_8873_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5903..6385)
DNA (483bp) protein (161aa)
asnC family transcriptional regulator id=12549674 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
asnC family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_8873_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6517..7797
DNA (1281bp) protein (427aa)
methionine gamma-lyase (EC:4.4.1.11) id=12549675 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
methionine gamma-lyase (EC:4.4.1.11)
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_8873_curated_10
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7742..8218)
DNA (477bp) protein (159aa)
AsnC family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023762A7
AsnC family transcriptional regulator {ECO:0000313|EMBL:EHL24426.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
asnC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8873_curated_11
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8320..9219
DNA (900bp) protein (300aa)
2-oxo-acid dehydrogenase E1; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT70_9BURK
Tax=GWA2_Burkholderiales_64_37_curated
Displaying 11 items

View Taxonomy