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SCNpilot_expt_1000_bf_scaffold_1554_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1554_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..490)
DNA (489bp) protein (163aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICD6_9BURK
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AFU46976.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1554_curated_2
unknown

Not on your lists

611..736
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1554_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1166..2677)
DNA (1512bp) protein (504aa)
Pas modulated Fis family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I204_9BURK
pas modulated Fis family transcriptional regulator
Pas modulated Fis family transcriptional regulator {ECO:0000313|EMBL:AFU46977.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1554_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2813..3418)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVR3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46978.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1554_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3646..4245)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6Y7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46979.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1554_curated_6
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4643..4948
DNA (306bp) protein (102aa)
Uncharacterized protein id=12553101 bin=BDI species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RBG_13_Deltaproteobacteria_51_10_curated
SCNpilot_expt_1000_bf_scaffold_1554_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5216..5737)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3A1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46980.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1554_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5737..6696)
DNA (960bp) protein (320aa)
Periplasmic tricarboxylate binding receptor (TctC) n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICE3_9BURK
periplasmic tricarboxylate binding receptor (TctC)
Periplasmic tricarboxylate binding receptor (TctC) {ECO:0000313|EMBL:AFU46981.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1554_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6814..7509
DNA (696bp) protein (232aa)
Two component transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I209_9BURK
two component transcriptional regulator
Two component transcriptional regulator {ECO:0000313|EMBL:AFU46982.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1554_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7506..8966
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVR7_9BURK
integral membrane sensor signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_1554_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8963..9391
DNA (429bp) protein (143aa)
RNA-binding S4 domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6Z2_9BURK
RNA-binding S4 domain-containing protein
RNA-binding S4 domain-containing protein {ECO:0000313|EMBL:AFU46984.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1554_curated_12
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9689..10852)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. COS3 RepID=U7GUS4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKH19892.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1554_curated_13
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11019..11681)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036CAA21
radC; DNA repair protein RadC-like protein; K03630 DNA repair protein RadC
Tax=RBG_16_Gammaproteobacteria_51_14_curated
SCNpilot_expt_1000_bf_scaffold_1554_curated_14
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11686..14607)
DNA (2922bp) protein (974aa)
putative type I restriction-modification system, site-specific deoxyribonuclease (EC:3.1.21.3)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003747D43
Type III restriction protein res subunit {ECO:0000313|EMBL:EGV17867.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
SCNpilot_expt_1000_bf_scaffold_1554_curated_15
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14610..14936)
DNA (327bp) protein (109aa)
Putative uncharacterized protein id=1994873 bin=GWB2_Geobacter-like_52_12 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCNpilot_expt_1000_bf_scaffold_1554_curated_16
unknown

Not on your lists

15642..16280
DNA (639bp) protein (213aa)

This feature has no annotations

Displaying 16 items

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