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SCNpilot_expt_1000_bf_scaffold_9259_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9259_curated_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..897)
DNA (897bp) protein (299aa)
MFS transporter permease n=1 Tax=Afipia birgiae RepID=UPI0002FD5A46
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABD06351.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_expt_1000_bf_scaffold_9259_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(894..1937)
DNA (1044bp) protein (348aa)
glyceraldehyde-3-phosphate dehydrogenase, type I; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002E25918
SCNpilot_expt_1000_bf_scaffold_9259_curated_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1949..2818)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036F2705
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABD06349.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_expt_1000_bf_scaffold_9259_curated_4
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2906..3922
DNA (1017bp) protein (339aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Afipia birgiae RepID=UPI00030DC587
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
ABC transporter phosphate binding protein; K02040 phosphate transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_9259_curated_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3926..4360
DNA (435bp) protein (145aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
arsC2; arsenate reductase ArsC (EC:1.20.4.1)
arsenate reductase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F73B
SCNpilot_expt_1000_bf_scaffold_9259_curated_6
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4391..4666)
DNA (276bp) protein (92aa)
Tax=RBG_16_Gallionellales_56_9_curated
SCNpilot_expt_1000_bf_scaffold_9259_curated_7
unknown

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comp(5001..5201)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9259_curated_8
bacterium YEK0313, Bacteria

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comp(5441..5569)
DNA (129bp) protein (43aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E1747A
Cytochrome c-550 {ECO:0000313|EMBL:CEJ10631.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Displaying 8 items

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