name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1044_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..219
|
cyclophilin type peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBF1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38079.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
289..1371
|
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Afipia birgiae RepID=UPI000382A211
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1368..2501
|
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P658_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_4
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2505..2717)
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000308698A
Uncharacterized protein {ECO:0000313|EMBL:EGP07636.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_5
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2946..3920
|
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Cysteine synthase A n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PCN8_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3923..4165
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FDFB3B
Uncharacterized protein {ECO:0000313|EMBL:EKS38075.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4168..5094)
|
Glycine/betaine/sarcosine/D-proline reductase family selenoprotein B n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBE3_9BRAD
Glycine/betaine/sarcosine/D-proline reductase family selenoprotein B {ECO:0000313|EMBL:EKS38074.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5206..5376
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI74_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38073.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_9
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5522..6202)
|
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034B5CEB
Uncharacterized protein {ECO:0000313|EMBL:EJL84930.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
TPR domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_10
unknown
|
Not on your lists |
7146..7289
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7341..10001)
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PPZ0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40418.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10195..10800)
|
beta-1-3, beta-1-6-glucan biosynthesis protein n=1 Tax=Afipia birgiae RepID=UPI00036975CD
Uncharacterized protein {ECO:0000313|EMBL:EGP07644.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10851..12614
|
beta-(1-6) glucans synthase n=1 Tax=Afipia birgiae RepID=UPI000308185C
Uncharacterized protein {ECO:0000313|EMBL:EKS40420.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
putative beta (1-6) glucans synthase
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12574..12954)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P960_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38066.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13028..14209)
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002D57FE2
Uncharacterized protein {ECO:0000313|EMBL:EKS38065.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_16
unknown
|
Not on your lists |
comp(14206..14331)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_17
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14378..15685
|
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
Bifunctional protein GlmU n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMT4_9BRAD
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15978..17804
|
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glucosamine--fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMT6_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17928..18701
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P643_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38062.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_20
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18801..19613
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PFV4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40426.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
type 11 methyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_21
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19625..21739)
|
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EGP07443.1}; EC=3.6.1.- {ECO:0000313|EMBL:EGP07443.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
recG; ATP-dependent DNA helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QMU0_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21804..22175
|
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003723029
Uncharacterized protein {ECO:0000313|EMBL:EKS38060.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein; K09159 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22172..25687
|
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PBC6_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25881..26270)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PI62_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38058.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
PRC-barrel protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_25
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26486..27724)
|
signal peptide protein n=1 Tax=Afipia birgiae RepID=UPI0003162DB5
Uncharacterized protein {ECO:0000313|EMBL:EKS40431.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1044_curated_26
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27810..29039)
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PCR9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS40432.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
|