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SCNpilot_expt_1000_bf_scaffold_511_curated

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_511_curated_1
unknown

Not on your lists

2..256
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_511_curated_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425..883)
DNA (459bp) protein (153aa)
arsenate reductase (azurin) (EC:1.20.98.1); K08356 arsenite oxidase large subunit [EC:1.20.9.1]
Arsenate reductase (Azurin) {ECO:0000313|EMBL:ABE65011.1}; EC=1.20.9.1 {ECO:0000313|EMBL:ABE65011.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Arsenate reductase (Azurin) n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFI6_NITHX
SCNpilot_expt_1000_bf_scaffold_511_curated_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1042..1692
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EH71_BRASB
Nickel transporter {ECO:0000313|EMBL:KJC60495.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein; K08970 nickel/cobalt exporter
SCNpilot_expt_1000_bf_scaffold_511_curated_4
unknown

Not on your lists

1747..2181
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000364B6B4
SCNpilot_expt_1000_bf_scaffold_511_curated_5
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2233..3453
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUL7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36319.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
RND family efflux transporter MFP subunit
SCNpilot_expt_1000_bf_scaffold_511_curated_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3479..3892
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUL7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36319.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
RND family efflux transporter MFP subunit
SCNpilot_expt_1000_bf_scaffold_511_curated_7
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3901..7020
DNA (3120bp) protein (1040aa)
Heavy metal efflux pump CzcA n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUM5_9BRAD
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:EAQ36318.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
CzcA family heavy metal efflux pump; K07239 heavy-metal exporter, HME family
SCNpilot_expt_1000_bf_scaffold_511_curated_8
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7044..7418
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUM4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36317.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_511_curated_9
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7562..8899
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F4C738
Probable NreB protein {ECO:0000313|EMBL:EAQ36316.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
major facilitator superfamily protein
SCNpilot_expt_1000_bf_scaffold_511_curated_10
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9031..9435
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSR0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG62816.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_511_curated_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9602..10429
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QU17_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG63273.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
sodM; superoxide dismutase SodM-like protein
SCNpilot_expt_1000_bf_scaffold_511_curated_12
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10449..11036
DNA (588bp) protein (196aa)
manganese and iron superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Chromium (VI) response protein n=1 Tax=Ochrobactrum anthropi RepID=A1Z268_OCHAN
Chromium (VI) response protein {ECO:0000313|EMBL:ABM53865.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
SCNpilot_expt_1000_bf_scaffold_511_curated_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11073..11945
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D2Q9_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL11920.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_expt_1000_bf_scaffold_511_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11998..13401
DNA (1404bp) protein (468aa)
chromate transporter n=1 Tax=Afipia birgiae RepID=UPI0002FBDFC8
Chromate ion transporter (CHR) family chromate transporter {ECO:0000313|EMBL:EKS34460.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
chromate transport protein; K07240 chromate transporter rbh
SCNpilot_expt_1000_bf_scaffold_511_curated_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13565..14617
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM64_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62683.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_511_curated_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14640..15431
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM65_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62682.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_1000_bf_scaffold_511_curated_17
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15717..17114)
DNA (1398bp) protein (466aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WGV5_RHILT
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:EJC84668.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
hypothetical protein; K06921
SCNpilot_expt_1000_bf_scaffold_511_curated_18
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17384..18031
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B43F40
Uncharacterized protein {ECO:0000313|EMBL:EUB97527.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_511_curated_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18102..18437
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07NV5_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ06379.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_expt_1000_bf_scaffold_511_curated_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18470..20458
DNA (1989bp) protein (663aa)
AAA ATPase central domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VQ04_RHOPX
AAA ATPase
AAA ATPase central domain protein {ECO:0000313|EMBL:ADU43681.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_1000_bf_scaffold_511_curated_21

Not on your lists

21212..21802
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036AD29E
Uncharacterized protein {ECO:0000313|EMBL:KKN91984.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_511_curated_22

Not on your lists

21816..24002
DNA (2187bp) protein (729aa)
hypothetical protein, partial n=1 Tax=Afipia birgiae RepID=UPI000374FCB3
Uncharacterized protein {ECO:0000313|EMBL:KKN91985.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
integrase catalytic subunit; K07497 putative transposase
SCNpilot_expt_1000_bf_scaffold_511_curated_23

Not on your lists

24015..25106
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DC9E2E
Uncharacterized protein {ECO:0000313|EMBL:KKN91986.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TniB family protein
SCNpilot_expt_1000_bf_scaffold_511_curated_24

Not on your lists

25103..26686
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037553CE
Uncharacterized protein {ECO:0000313|EMBL:KKN91987.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_511_curated_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27409..28620
DNA (1212bp) protein (404aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX26_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD07234.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_expt_1000_bf_scaffold_511_curated_26
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28604..28813)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C9S8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIZ80215.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_511_curated_27
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28810..29166)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICM9_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA90054.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_expt_1000_bf_scaffold_511_curated_28
unknown

Not on your lists

comp(29327..30025)
DNA (699bp) protein (233aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_511_curated_29
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30329..33682)
DNA (3354bp) protein (1118aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IDD1_BEII9
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACB93983.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_expt_1000_bf_scaffold_511_curated_30
unknown

Not on your lists

comp(33865..34326)
DNA (462bp) protein (154aa)

This feature has no annotations

Displaying items 1-30 of 141 in total

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