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SCNpilot_expt_1000_bf_scaffold_4558_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4558_curated_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..574)
DNA (573bp) protein (191aa)
murein transglycosylase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037BCD05
ABC transporter amino acid-binding protein {ECO:0000313|EMBL:BAR58884.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
glnH; glutamine-binding protein GlnH
SCNpilot_expt_1000_bf_scaffold_4558_curated_2
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(670..2058)
DNA (1389bp) protein (463aa)
aminotransferase (EC:2.6.1.-) id=14625640 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_expt_1000_bf_scaffold_4558_curated_3
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2086..3255)
DNA (1170bp) protein (390aa)
Selenocysteine lyase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WDU7_9BRAD
Selenocysteine lyase {ECO:0000313|EMBL:EJN10845.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
class V aminotransferase
SCNpilot_expt_1000_bf_scaffold_4558_curated_4
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3257..4558)
DNA (1302bp) protein (434aa)
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Glycine/serine hydroxymethyltransferase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CR04_9BRAD
Glycine/serine hydroxymethyltransferase {ECO:0000313|EMBL:EJN10844.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
SCNpilot_expt_1000_bf_scaffold_4558_curated_5
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4747..5646
DNA (900bp) protein (300aa)
Transcriptional regulator n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CR00_9BRAD
Transcriptional regulator {ECO:0000313|EMBL:EJN10839.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
LysR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_4558_curated_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5672..6604)
DNA (933bp) protein (311aa)
2-hydroxyacid dehydrogenase (EC:1.-.-.-); K12972 gyoxylate/hydroxypyruvate reductase A [EC:1.1.1.79 1.1.1.81]
2-hydroxyacid dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5J5_9PROT
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EKE78326.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_expt_1000_bf_scaffold_4558_curated_7

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comp(6626..7756)
DNA (1131bp) protein (377aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=1457714 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote AD1000_105_G07.;"
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00037E9813
SCNpilot_expt_1000_bf_scaffold_4558_curated_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7887..8714
DNA (828bp) protein (276aa)
Transcriptional regulator, GntR family n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJR6_9CHLR
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCNpilot_expt_1000_bf_scaffold_4558_curated_9
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8749..9744
DNA (996bp) protein (332aa)
NAD/NADP octopine/nopaline dehydrogenase n=1 Tax=Dickeya dadantii (strain Ech703) RepID=C6C4Y0_DICDC
NAD/NADP octopine/nopaline dehydrogenase
NAD/NADP octopine/nopaline dehydrogenase {ECO:0000313|EMBL:ACS85590.1}; Flags: Precursor;; TaxID=579405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya dadantii (strain Ech703).;"
Displaying 9 items

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