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SCNpilot_expt_1000_bf_scaffold_9538_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9538_curated_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..927)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E9BAB0
Uncharacterized protein {ECO:0000313|EMBL:EKS39448.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_9538_curated_2
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1055..1840
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000309A785
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACA18986.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_expt_1000_bf_scaffold_9538_curated_3
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1890..2732)
DNA (843bp) protein (281aa)
hmuV; Hemin import ATP-binding protein HmuV (EC:3.6.3.-); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Hemin import ATP-binding protein HmuV {ECO:0000313|EMBL:CCB67662.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCB67662.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Hemin import ATP-binding protein HmuV n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JC40_HYPSM
SCNpilot_expt_1000_bf_scaffold_9538_curated_4
unknown

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comp(2732..3724)
DNA (993bp) protein (331aa)
Hemin transport system permease protein hmuU n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JC39_HYPSM
Hemin transport system permease protein HmuU {ECO:0000313|EMBL:CPR19347.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hmuU; Hemin transport system permease hmuU; K02015 iron complex transport system permease protein
SCNpilot_expt_1000_bf_scaffold_9538_curated_5
unknown

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comp(3831..4418)
DNA (588bp) protein (196aa)
Periplasmic binding protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JC38_HYPSM
Periplasmic binding protein {ECO:0000313|EMBL:CPR19350.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
Periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_9538_curated_6
unknown

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comp(5098..5553)
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9538_curated_7
unknown

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6299..6445
DNA (147bp) protein (49aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370C55D
TonB-denpendent receptor {ECO:0000313|EMBL:CPR19354.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
TonB-dependentheme/hemoglobin receptor; K02014 iron complex outermembrane recepter protein
Displaying 7 items

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