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SCNpilot_expt_1000_bf_scaffold_9593_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9593_curated_1
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1..576
DNA (576bp) protein (192aa)
Haloacid dehalogenase n=1 Tax=Pandoraea sp. RB-44 RepID=V5UHY7_9BURK
haloacid dehalogenase
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_expt_1000_bf_scaffold_9593_curated_2
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(870..1223)
DNA (354bp) protein (118aa)
nucleotidyl transferase/polymerase; K00970 poly(A) polymerase [EC:2.7.7.19]
Poly A polymerase family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTH4_9PROT
Poly(A) polymerase {ECO:0000313|EMBL:AJY45977.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCNpilot_expt_1000_bf_scaffold_9593_curated_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1518..2138
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG08948.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_expt_1000_bf_scaffold_9593_curated_4
unknown

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comp(2144..2410)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEW0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR19985.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_9593_curated_5
unknown

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comp(2407..3084)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036C2C4D
Uncharacterized protein {ECO:0000313|EMBL:CPR19987.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
NUDIX hydrolase
SCNpilot_expt_1000_bf_scaffold_9593_curated_6
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3191..3709)
DNA (519bp) protein (173aa)
Putative HlyC/CorC family of transporters with CBS domains n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFL6_HYPSM
HlyC/CorC family of transporters with CBS domains
Putative HlyC/CorC family of transporters with CBS domains {ECO:0000313|EMBL:CCB67980.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_9593_curated_7
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4274..4678)
DNA (405bp) protein (135aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Metalloprotease n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBK2_9RHIZ
hypothetical protein; K07042 probable rRNA maturation factor
SCNpilot_expt_1000_bf_scaffold_9593_curated_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4890..5111)
DNA (222bp) protein (74aa)
phosphate starvation protein PhoH n=1 Tax=Afipia birgiae RepID=UPI0002D9312B
PhoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins
Uncharacterized protein {ECO:0000313|EMBL:EKS33186.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Displaying 8 items

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