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SCNpilot_expt_1000_bf_scaffold_5041_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5041_curated_1
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..354)
DNA (354bp) protein (118aa)
ABC-type transporter, permease component: PepT family n=2 Tax=Burkholderiaceae RepID=Q0K3A8_CUPNH
dppC3; ABC transporter permease; K02034 peptide/nickel transport system permease protein
ABC transporter permease {ECO:0000313|EMBL:EON19086.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
SCNpilot_expt_1000_bf_scaffold_5041_curated_2
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(354..1310)
DNA (957bp) protein (319aa)
ABC transporter permease n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S7D4_9BURK
ABC transporter permease {ECO:0000313|EMBL:EHP41528.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
dppB3; ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_expt_1000_bf_scaffold_5041_curated_3
unknown

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comp(2190..2300)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5041_curated_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2675..3439)
DNA (765bp) protein (255aa)
LemA protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IH52_9BRAD
Peptidase {ECO:0000313|EMBL:KJC54155.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
proline M24 family dipeptidase
SCNpilot_expt_1000_bf_scaffold_5041_curated_5
unknown

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3445..3645
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5041_curated_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3953..4642)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036F2570
Uncharacterized protein {ECO:0000313|EMBL:EKS36606.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
DNA-binding transcriptional activator of the SARP family
SCNpilot_expt_1000_bf_scaffold_5041_curated_7
unknown

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5295..5621
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5041_curated_8
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6161..7006
DNA (846bp) protein (282aa)
methyltransferase (EC:2.1.1.-)
Methyltransferase n=1 Tax=Achromobacter piechaudii HLE RepID=J4QWS4_9BURK
SAM-dependent methlyltransferase {ECO:0000313|EMBL:KGY25869.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
SCNpilot_expt_1000_bf_scaffold_5041_curated_9
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7063..7536
DNA (474bp) protein (158aa)
Cupin region n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GV5_POLSJ
hypothetical protein
Cupin region {ECO:0000313|EMBL:ABE42237.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCNpilot_expt_1000_bf_scaffold_5041_curated_10
unknown

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comp(8223..8456)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5041_curated_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9189..9596
DNA (408bp) protein (136aa)
Alpha/beta fold superfamily hydrolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJG6_9RHIZ
Alpha/beta fold superfamily hydrolase {ECO:0000313|EMBL:EHK59131.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_expt_1000_bf_scaffold_5041_curated_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9623..10483)
DNA (861bp) protein (287aa)
FAD-dependent oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00038153ED
Bradyrhizobium elkanii strain UASWS1015 Contig170, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50383.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative oxidoreductase protein
Displaying 12 items

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