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SCNpilot_expt_1000_bf_scaffold_6053_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6053_curated_1
unknown

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comp(123..629)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Nocardiopsis halophila RepID=UPI00037EBB23
SCNpilot_expt_1000_bf_scaffold_6053_curated_2
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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805..1056
DNA (252bp) protein (84aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CRA9_9RHIZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIZ86697.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
putative oxidoreductase
SCNpilot_expt_1000_bf_scaffold_6053_curated_3
unknown

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comp(1143..1523)
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6053_curated_4
Pseudomonas sp. H2, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1604..2071
DNA (468bp) protein (156aa)
Aminoglycoside phosphotransferase n=1 Tax=Pseudomonas putida H8234 RepID=R9VC62_PSEPU
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:KGI92152.1}; TaxID=658612 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. H2.;"
aminoglycoside phosphotransferase
SCNpilot_expt_1000_bf_scaffold_6053_curated_5
unknown

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2068..2427
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6053_curated_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2442..2855
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TWC1_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84504.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6053_curated_7
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3087..3776
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:AHY52944.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
SCNpilot_expt_1000_bf_scaffold_6053_curated_8
unknown

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4011..4187
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6053_curated_9
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4269..5147)
DNA (879bp) protein (293aa)
citryl-CoA lyase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E09225
Citryl-CoA lyase {ECO:0000313|EMBL:GAK44278.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCNpilot_expt_1000_bf_scaffold_6053_curated_10
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5387..6304
DNA (918bp) protein (306aa)
Putative membrane protein, DUF81 domain protein n=1 Tax=Rhizobium sp. RepID=L0NBZ2_RHISP
Permease {ECO:0000313|EMBL:EXL09429.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
putative permease; putative membrane protein
SCNpilot_expt_1000_bf_scaffold_6053_curated_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6438..7874
DNA (1437bp) protein (479aa)
succinate-semialdehyde dehydrogenase (NAD(P)+) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPK3_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_expt_1000_bf_scaffold_6053_curated_12

Not on your lists

comp(7926..8354)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000378B042
Marine sediment metagenome DNA, contig: S01H1_S41590 {ECO:0000313|EMBL:GAG42561.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6053_curated_13
unknown

Not on your lists

comp(8613..8774)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 13 items

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