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SCNpilot_expt_1000_bf_scaffold_2663_curated

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2663_curated_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6..941)
DNA (936bp) protein (312aa)
methymalonyl-coa mutase c-terminal domain protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
methylmalonyl-CoA epimerase id=14627778 bin=bin7_NC10_sister species=Thermoanaerobacterium saccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
SCNpilot_expt_1000_bf_scaffold_2663_curated_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(938..2143)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Pseudomonas agarici RepID=UPI0002ED5F3A
CaiB/baiF CoA-transferase family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_expt_1000_bf_scaffold_2663_curated_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2227..2985)
DNA (759bp) protein (253aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ40_NITGG
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_expt_1000_bf_scaffold_2663_curated_4
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3172..3861)
DNA (690bp) protein (230aa)
GntR family transcriptional regulator n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2L225_9PROT
GntR family transcriptional regulator {ECO:0000313|EMBL:AJD51448.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2663_curated_5
unknown

Not on your lists

4206..4475
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2663_curated_6
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4691..4909)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036B88E0
phosphonate metabolism protein
Phosphonate metabolim protein, transferase hexapeptide repeat family {ECO:0000313|EMBL:ADH91204.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_expt_1000_bf_scaffold_2663_curated_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4906..5292)
DNA (387bp) protein (129aa)
Putative acetyltransferase {ECO:0000313|EMBL:KFC65065.1}; EC=2.3.1.- {ECO:0000313|EMBL:KFC65065.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
acetyltransferase; K00680 [EC:2.3.1.-]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036B88E0
SCNpilot_expt_1000_bf_scaffold_2663_curated_8
unknown

Not on your lists

comp(5904..6164)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2663_curated_9
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6655..7317
DNA (663bp) protein (221aa)
phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17); K00551 phosphatidylethanolamine N-methyltransferase [EC:2.1.1.17]
Phosphatidylethanolamine N-methyltransferase {ECO:0000313|EMBL:ACB22368.1}; EC=2.1.1.17 {ECO:0000313|EMBL:ACB22368.1};; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SAM-dependent methlyltransferase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034A7CB2
SCNpilot_expt_1000_bf_scaffold_2663_curated_10
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7377..7988
DNA (612bp) protein (204aa)
Acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6N4_9BRAD
Membrane protein {ECO:0000313|EMBL:KJC61106.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2663_curated_11
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8047..9714)
DNA (1668bp) protein (556aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Aminotransferase class-III n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U7W7_METS4
Aminotransferase class-III {ECO:0000313|EMBL:ACA18963.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_expt_1000_bf_scaffold_2663_curated_12
unknown

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comp(9780..10259)
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2663_curated_13
unknown

Not on your lists

comp(10259..10540)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2663_curated_14
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10669..11151
DNA (483bp) protein (161aa)
Phosphonate C-P lyase system protein PhnG n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IV25_METNO
phosphonate C-P lyase system protein PhnG; K06166 PhnG protein
Phosphonate C-P lyase system protein PhnG {ECO:0000313|EMBL:ACL59083.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_2663_curated_15
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11155..11754
DNA (600bp) protein (200aa)
hypothetical protein n=2 Tax=Xanthobacteraceae RepID=UPI00035C6C6A
PhnH protein {ECO:0000313|EMBL:BAQ44656.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
phosphonate C-P lyase system protein PhnH; K06165 PhnH protein
SCNpilot_expt_1000_bf_scaffold_2663_curated_16
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11755..12855
DNA (1101bp) protein (367aa)
Putative PhnI protein, phosphonate metabolism n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RR15_9BRAD
Putative PhnI protein, phosphonate metabolism {ECO:0000313|EMBL:CCD84392.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
PhnI protein, phosphonate metabolism; K06164 PhnI protein
SCNpilot_expt_1000_bf_scaffold_2663_curated_17
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12852..13727
DNA (876bp) protein (292aa)
carbon-phosphorus lyase complex subunit PhnJ n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A2F780
phosphonate metabolism protein PhnJ; K06163 PhnJ protein
Putative PhnJ protein, phosphonate metabolism {ECO:0000313|EMBL:ABQ37788.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_expt_1000_bf_scaffold_2663_curated_18
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13724..14509
DNA (786bp) protein (262aa)
Phosphonate C-P lyase system protein PhnK n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEW8_XANP2
phnK; phosphonate C-P lyase system protein PhnK; K05781 putative phosphonate transport system ATP-binding protein
Phosphonate C-P lyase system protein PhnK {ECO:0000313|EMBL:ABS66561.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_2663_curated_19
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14515..15231
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EAC3C7
phosphonate C-P lyase system protein PhnL; K05780 putative phosphonate transport system ATP-binding protein
Phosphonate C-P lyase system protein PhnL {ECO:0000313|EMBL:GAN51540.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
SCNpilot_expt_1000_bf_scaffold_2663_curated_20
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15228..16370
DNA (1143bp) protein (381aa)
Phosphonate metabolism protein PhnM n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEW6_XANP2
phosphonate metabolism protein PhnM; K06162 PhnM protein
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:ABS66559.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_2663_curated_21
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16360..16971
DNA (612bp) protein (204aa)
phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; K05774 ribose 1,5-bisphosphokinase [EC:2.7.4.23]
Ribose 1,5-bisphosphate phosphokinase PhnN n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IV32_METNO
Uncharacterized protein {ECO:0000313|EMBL:KKC37948.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
SCNpilot_expt_1000_bf_scaffold_2663_curated_22
bacterium YEK0313, Bacteria

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comp(16955..17665)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IG56_XANP2
Uncharacterized protein {ECO:0000313|EMBL:CEJ14404.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2663_curated_23
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17807..18970
DNA (1164bp) protein (388aa)
ceramide glucosyltransferase (EC:2.4.1.80); K00720 ceramide glucosyltransferase [EC:2.4.1.80]
Ceramide glucosyltransferase {ECO:0000313|EMBL:CCB67500.1}; EC=2.4.1.80 {ECO:0000313|EMBL:CCB67500.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037C6334
SCNpilot_expt_1000_bf_scaffold_2663_curated_24
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19002..19400
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037BC74B
phoB; phosphate regulon transcriptional regulatory protein PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:AEI07971.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_1000_bf_scaffold_2663_curated_25
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19428..20135
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003765806
Ser/threonine protein phosphatase {ECO:0000313|EMBL:AHB47667.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
metallophosphoesterase
Displaying 25 items

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