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SCNpilot_expt_1000_bf_scaffold_5354_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5354_curated_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1046)
DNA (1044bp) protein (348aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:AGK59150.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AGK59150.1};; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
DNA polymerase III subunits gamma and tau n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BG96_9RHIZ
SCNpilot_expt_1000_bf_scaffold_5354_curated_2
Pseudogymnoascus destructans, Pseudogymnoascus, Leotiomycetes, Ascomycota, Fungi

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1738..2295
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Pseudogymnoascus destructans (strain ATCC MYA-4855 / 20631-21) RepID=L8FP69_PSED2
Uncharacterized protein {ECO:0000313|EMBL:ELR02349.1}; TaxID=658429 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus.;" source="Pseudogymnoascus destructans (strain ATCC MYA-4855 / 20631-21) (Bat; white-nose syndrome fungus) (Geomyces destructans).;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5354_curated_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2284..2715)
DNA (432bp) protein (144aa)
PREDICTED: nudix hydrolase 16, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1149B
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABS68675.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_5354_curated_4
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2838..3329
DNA (492bp) protein (164aa)
Putative nucleoside 2-deoxyribosyltransferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HVX1_AZOC5
nucleoside 2-deoxyribosyltransferase
Putative nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:BAF90366.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_expt_1000_bf_scaffold_5354_curated_5
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3351..4601
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I1C3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN12231.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5354_curated_6
unknown

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comp(5277..5672)
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5354_curated_7
bacterium YEK0313, Bacteria

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5975..6889
DNA (915bp) protein (305aa)
DNA-binding transcriptional activator of the SARP family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WHY0_9BRAD
Bacterial transcriptional activator domain protein {ECO:0000313|EMBL:CEJ15586.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
trifolitoxin synthesis, TfuA
SCNpilot_expt_1000_bf_scaffold_5354_curated_8
unknown

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comp(6914..7330)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5354_curated_9
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7367..9136)
DNA (1770bp) protein (590aa)
Heme peroxidase family protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I1N2_9BRAD
Heme peroxidase family protein {ECO:0000313|EMBL:EJN12228.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
SCNpilot_expt_1000_bf_scaffold_5354_curated_10
unknown

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9337..9651
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5354_curated_11
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9739..10167
DNA (429bp) protein (143aa)
peroxiredoxin n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000313019B
Peroxiredoxin {ECO:0000313|EMBL:EXS71634.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
osmC; osmotically inducible protein OsmC; K04063 osmotically inducible protein OsmC
SCNpilot_expt_1000_bf_scaffold_5354_curated_12
bacterium YEK0313, Bacteria

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10256..10639
DNA (384bp) protein (128aa)
Short chain dehydrogenase family protein 65 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXZ3_ACHXA
4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 {ECO:0000313|EMBL:CEJ10994.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short chain dehydrogenase family protein 65
Displaying 12 items

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