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SCNpilot_expt_1000_bf_scaffold_9952_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_9952_curated_1
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..273)
DNA (273bp) protein (91aa)
carnitine dehydratase n=1 Tax=Ralstonia solanacearum RepID=UPI00018163E2
Probable COG1804, CaiB, predicted acyl-CoA transferases/carnitine dehydratase {ECO:0000313|EMBL:EAP71053.1}; TaxID=342110 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum UW551.;"
frc; formyl-coenzyme a transferase (formyl-CoA transferase)
SCNpilot_expt_1000_bf_scaffold_9952_curated_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(825..1931)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035FD4E2
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AGK58939.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_9952_curated_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2331..2750)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BE34_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK58385.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_9952_curated_4
unknown

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comp(2879..3607)
DNA (729bp) protein (243aa)
ABC transporter related protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPN6_HYPDA
ABC transporter {ECO:0000313|EMBL:CPR21837.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_9952_curated_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3632..4585)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BBB5_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57415.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_expt_1000_bf_scaffold_9952_curated_6
unknown

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5446..5754
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_9952_curated_7
unknown

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comp(5688..6551)
DNA (864bp) protein (288aa)
alpha/beta hydrolase fold protein; K03928 carboxylesterase [EC:3.1.1.1]
Alpha/beta hydrolase fold protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JPN3_HYPDA
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CPR21840.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCNpilot_expt_1000_bf_scaffold_9952_curated_8
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6718..7419)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000366B2A6
Crp/Fnr family transcription regulator {ECO:0000313|EMBL:AHB47188.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Crp/Fnr family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_9952_curated_9
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7577..7930
DNA (354bp) protein (118aa)
Guanylate cyclase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SB69_9RHIZ
Guanylate cyclase {ECO:0000313|EMBL:AHB47189.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Displaying 9 items

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