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SCNpilot_expt_1000_bf_scaffold_12323_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12323_curated_1
unknown

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596..763
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12323_curated_2
unknown

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760..963
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12323_curated_3
unknown

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comp(1071..1808)
DNA (738bp) protein (246aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_12323_curated_4
unknown

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2049..2159
DNA (111bp) protein (37aa)

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this is part of SoxA, assembly is broken here. Rose Kantor (11/25/15)
SCNpilot_expt_1000_bf_scaffold_12323_curated_5
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2174..2788
DNA (615bp) protein (205aa)
Sulfur oxidation protein SoxX n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKL7_9BRAD
hypothetical protein
Sulfur oxidation protein SoxX {ECO:0000313|EMBL:EGP08386.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
SCNpilot_expt_1000_bf_scaffold_12323_curated_6
bacterium YEK0313, Bacteria

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2864..3724
DNA (861bp) protein (287aa)
Sulfate thiol esterase SoxB n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07M24_RHOP5
2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase {ECO:0000313|EMBL:CEJ12776.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
5'-nucleotidase domain-containing protein
the gap below contains part of soxB Rose Kantor (11/25/15)
SCNpilot_expt_1000_bf_scaffold_12323_curated_7
unknown

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4746..5546
DNA (801bp) protein (267aa)
Cytochrome C biogenesis protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFW5_9RHIZ
Cytochrome C biogenesis protein {ECO:0000313|EMBL:CPR21270.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
cytochrome c biogenesis protein transmembrane region; K06196 cytochrome c-type biogenesis protein
SCNpilot_expt_1000_bf_scaffold_12323_curated_8
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5574..6098
DNA (525bp) protein (175aa)
thiD; bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase (EC:2.7.1.49 2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
Bifunctional: hydroxy-methylpyrimidine kinase (HMP kinase) hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase) {ECO:0000313|EMBL:CCB65127.1}; EC=2.7.1.49 {ECO:0000313|EMBL:CCB65127.1};; EC=2.7.4.7 {ECO:0000313|EMBL:CCB65127.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Bifunctional: hydroxy-methylpyrimidine kinase (HMP kinase) hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBQ1_HYPSM
Displaying 8 items

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