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SCNpilot_expt_1000_bf_scaffold_5060_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5060_curated_1
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..522)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000379E084
phaR; regulator for granule-associated proteins, PHB biosynthesis and acetyl-CoA flux
Putative regulator for granule-associated proteins, PHB biosynthesis and acetyl-CoA flux {ECO:0000313|EMBL:CCB67290.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_5060_curated_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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719..1906
DNA (1188bp) protein (396aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AHB47605.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AHB47605.1};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
phaA; beta-ketothiolase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035F6397
SCNpilot_expt_1000_bf_scaffold_5060_curated_3
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2039..2767
DNA (729bp) protein (243aa)
phaB; acetoacetyl-CoA reductase (EC:1.1.1.36); K00023 acetoacetyl-CoA reductase [EC:1.1.1.36]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037DDA9E
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:AHB47604.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCNpilot_expt_1000_bf_scaffold_5060_curated_4
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2961..3443
DNA (483bp) protein (161aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRA8_HALO1
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ACY17136.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
SCNpilot_expt_1000_bf_scaffold_5060_curated_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3571..4779
DNA (1209bp) protein (403aa)
Putative ABC transporter, substrate binding protein possible branched chain amino acid binding protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AX23_AZOBR
putative ABC transporter, substrate binding protein; possible branched chain amino acid binding protein
Putative ABC transporter, substrate binding protein possible branched chain amino acid binding protein {ECO:0000313|EMBL:CCD02432.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_expt_1000_bf_scaffold_5060_curated_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4956..6182)
DNA (1227bp) protein (409aa)
Phenylacetate-CoA ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Phenylacetate-CoA ligase putative n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWG8_POLGS
Phenylacetate-CoA ligase putative {ECO:0000313|EMBL:ADZ69267.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_expt_1000_bf_scaffold_5060_curated_7
unknown

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6414..6665
DNA (252bp) protein (84aa)

This feature has no annotations

Displaying 7 items

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